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L3_072_000M1_scaffold_231_11

Organism: dasL3_072_000M1_concoct_42_fa

near complete RP 45 / 55 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 9627..10664

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Clostridium sp. CAG:349 RepID=R6WHN0_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 345.0
  • Bit_score: 663
  • Evalue 7.00e-188
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 345.0
  • Bit_score: 663
  • Evalue 9.90e-188
RpoD4; RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 69.2
  • Coverage: 357.0
  • Bit_score: 475
  • Evalue 7.70e-132

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Taxonomy

Clostridium sp. CAG:349 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1038
ATGGAAAACAGGGAAGCCTTATTAAAGGCCGAAACCGACAAACTGATTGAAGAAGGCAAAAAGAAAGGCTCTTTAACTCAGGAAGAAATAATGTCAAAGCTTGAAAAGATTGACGCAACCGCAGACGAAATGGAGGACGTCTTCAAAACAATCGAAGCCGTCGTTCAGGTTGGGGAAACCGAAGATAACTTTGACAAGATTATGGCGGAAGGCAGTCTTGACGACTCCGTCAAAATGTATCTGAAAGACATCGGCCGCGTGCCGCTTTTGTCCGCCGAACGCGAGGTCGAACTTGCAAAACGCATGGAAGAAGGCGACGAGGAAGCAAAACGCATATTAAGCGAAGCCAACCTTCGTCTTGTCGTGTCGATTGCAAAGCGTTACGTCGGCAGAGGTATGCAGTTCCTTGACCTTATTCAGGAAGGCAACCTCGGGCTTATGAAAGCCGTCGAAAAATTCGATTACAGAAAGGGGTTCAAATTCTCGACCTACGCGACGTGGTGGATAAGGCAATCCATTACCCGCGCGATCGCCGACCAGGCAAGGACGATTCGTATCCCCGTGCATATGGTCGAAACCATAAACAAGCAGGTGCGCGCGACGCGTCAGCTTTTGCAAAAACTCGGCCGTGAACCCAGCCCCGAAGAAATTGCGGAGTTTATCGGTTCCACGCCCGAGCGCGTGCGTGAAATCCAAAAAATAGCACAGGATCCCGTGTCGCTCGAAACGCCTATCGGTGAGGAAGAAGACAGCCACCTCGGCGATTTTATCGAAGACAGCAACGCCGCAGCCCCCGCGGAAGTCGCGGAAGCAAATATGCTGCGCGAACAGCTTATAAGCGTTTTAAGCACGCTTACCCCGCGCGAAGAAAAAGTGTTAAGACTTCGTTACGGCATCGACGACAGCCATCCGAGAACGCTTGAAGAAGTCGGAAAAGAGTTCAACGTAACGCGTGAACGTATCCGCCAGATCGAAGCGAAGGCTTTAAGAAAACTGCGCCACCCGAACCGCATCAAAAAGCTGAAAGATTATACCTAA
PROTEIN sequence
Length: 346
MENREALLKAETDKLIEEGKKKGSLTQEEIMSKLEKIDATADEMEDVFKTIEAVVQVGETEDNFDKIMAEGSLDDSVKMYLKDIGRVPLLSAEREVELAKRMEEGDEEAKRILSEANLRLVVSIAKRYVGRGMQFLDLIQEGNLGLMKAVEKFDYRKGFKFSTYATWWIRQSITRAIADQARTIRIPVHMVETINKQVRATRQLLQKLGREPSPEEIAEFIGSTPERVREIQKIAQDPVSLETPIGEEEDSHLGDFIEDSNAAAPAEVAEANMLREQLISVLSTLTPREEKVLRLRYGIDDSHPRTLEEVGKEFNVTRERIRQIEAKALRKLRHPNRIKKLKDYT*