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L3_072_000M1_scaffold_121_27

Organism: dasL3_072_000M1_concoct_80_fa

near complete RP 43 / 55 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(20260..20754)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-24 subunit ECF subfamily n=1 Tax=Azospirillum sp. CAG:239 RepID=R6IVG9_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 158.0
  • Bit_score: 201
  • Evalue 6.20e-49
RNA polymerase sigma-24 subunit ECF subfamily {ECO:0000313|EMBL:CDB54358.1}; TaxID=1262705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.5
  • Coverage: 158.0
  • Bit_score: 201
  • Evalue 8.60e-49
RNA polymerase similarity KEGG
DB: KEGG
  • Identity: 34.8
  • Coverage: 164.0
  • Bit_score: 90
  • Evalue 3.30e-16

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Taxonomy

Azospirillum sp. CAG:239 → Azospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 495
ATGACGCCCGAGCAAACCGAACATCGCAATCTGATTCGCGCCGTCATCAAAAAACTGACCGGTTCGTATAATGAAGATTTGGAACAGGAGGTTTATCTGAAAGCATGGCAGAATCGCGACAAATATCAGGAAGAAGGCAAAATCCGCGCGTGGCTCGGTACGATAGCGGCCAATCTGTGCCGGGATTATTTCAAATCCCGTCTTTTCCGCGAAGATCAGAGCAAGGCCGGGGGCAACGAAATGCTTGAAAAAGTTGCCGTCCAAGGCAGACATGAAGAACGCCTTGATGCCAAAACGCGGCAAAGGATTATATTAAAAGCCGTGGACAACCTGCCGCCGCCTTTACGCAAAGTCGTTATATGGCATGAGTTTGAAGAAATGCCTTATGCCGAAATTGCCGGGCGTCTGAAGATTCCCGAAGGCACGGTCAAATCCAGATTATCAACCGCACGTAAAATTTTGGCTGAACAATTAAATTTTTTGAGAGGAGAATAG
PROTEIN sequence
Length: 165
MTPEQTEHRNLIRAVIKKLTGSYNEDLEQEVYLKAWQNRDKYQEEGKIRAWLGTIAANLCRDYFKSRLFREDQSKAGGNEMLEKVAVQGRHEERLDAKTRQRIILKAVDNLPPPLRKVVIWHEFEEMPYAEIAGRLKIPEGTVKSRLSTARKILAEQLNFLRGE*