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L3_072_000M1_scaffold_1916_14

Organism: dasL3_072_000M1_concoct_80_fa

near complete RP 43 / 55 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(12557..13042)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 167.0
  • Bit_score: 248
  • Evalue 4.60e-63
DNA-directed RNA polymerase subunit omega n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R7Y5_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 167.0
  • Bit_score: 248
  • Evalue 3.30e-63
rpoZ1; RNA polymerase subunit omega similarity KEGG
DB: KEGG
  • Identity: 52.1
  • Coverage: 144.0
  • Bit_score: 139
  • Evalue 8.00e-31

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Taxonomy

Proteobacteria bacterium CAG:495 → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 486
ATGGCTCGCGTTACTGTCGAAGATTGTATTGATAAAATTCCCAACCGCTACGAACTGCTTATGGTTGCCGCCCAAAGGGCAAAAGATATTGCTGCCGGCGCGCCGCTGACGGTTGCCCGTGACAATGACAAGAACTCGGTTGTCGCCCTGCGCGAAATTGCCGACGAGACGGTCAGCATTGAAGAATTGCAGAAATCTCTGGTTATGGGATTGCAGAAGTTTGTTGAAGTTGAGGAGCCTGAGGAAGAAGAGCTTGAGATTTTGGCAGCCGAAAAAGAACTGGCCGATTTGGACGAGCAGTTTACAGGTTTGCTGCCTGATGCCGAGCTGGATGACAATATGCAGATTCACGGCAGCGATGACGATGCCTTGGATTTGGATGCGGAAACCGAAGGCGATATTGATTTGGACGGCGGCCTCGGCGACGGGCTGGATGATGAAATCAGCGACGACGGTTTTGACGGCGCGGAAGATTTTGACGAATAG
PROTEIN sequence
Length: 162
MARVTVEDCIDKIPNRYELLMVAAQRAKDIAAGAPLTVARDNDKNSVVALREIADETVSIEELQKSLVMGLQKFVEVEEPEEEELEILAAEKELADLDEQFTGLLPDAELDDNMQIHGSDDDALDLDAETEGDIDLDGGLGDGLDDEISDDGFDGAEDFDE*