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L3_072_000M1_scaffold_85_10

Organism: dasL3_072_000M1_concoct_82_fa

near complete RP 49 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(7581..9014)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.3
  • Coverage: 484.0
  • Bit_score: 470
  • Evalue 1.70e-129
rho; transcription termination factor Rho (EC:3.6.4.-) similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 471.0
  • Bit_score: 451
  • Evalue 2.80e-124
Transcription termination factor Rho n=1 Tax=Clostridium sp. CAG:349 RepID=R6WYC9_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 484.0
  • Bit_score: 470
  • Evalue 1.20e-129

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Taxonomy

Clostridium sp. CAG:349 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1434
ATGAAAGAATTTATTCCCTTTACTTACGAAATGCTGGATAAAGAGCATCTGTCCAGCATACGGGAGCTCGGAAGACAGATCGGCGTGCGTTCGCCCTCCAGTCTTCCCAAGGACGAACTGATCGATCAGATCATCCGCATACAGAAGGGGGAGCTCTCTCCCGTCACCGCGTCCAAGCGGGGCGCGCCGCCCAAGATCAGGGTGGATATCAGCCATTTTTTCCGCGAAAAGACGGAAGAGAGAGCGGAGCCGAAGCCGGATGCACAGCGCGGGTACCGGTACCGCCGCCAGGTTCCGCCCATCGTGCGCGATCACGACGCGCTGGAAATCGAGGGCGTTCTGGAACAGCACGTCTCCGGCTACGGGTTTCTGCGCGTCAACAACTATGAAAATTCCAAGGACGACTGCTACGTTTCCCTGCAGAGCATCCGCCAGTACAATCTCCGGCGGGGAGACAAGGTGCGCGCGCTTGCGCGGCCGAACAACGAGGGCGCGCCCGCCCTGCAGCAGGTGCTCGCCATCAACGACTGCGATCCCGAAGTATTCCGCAACCGCGCGAATTTCGACGATCTCGTCCCGTATTATCCCACCGAGCGCTTAAAACTCGAGCGGGAGGATATGGAGGGGGACGCCGCCATCCGCTGCGTAGACCTCTTCTGCCCGGTCGGAAAGGGACAGCGCGGCCTCATCGTCGCGCCCCCCAAGACGGGCAAGACCACGATTTTAAAGAAGATCGCCCAGTCCATCGAGAAAAATCACCCCGAAGTCAAGCTCTTTTTGCTGCTCATCGACGAGCGCCCGGAAGAGGTGACGGATATGAAGCGGAGCATTCAGGGAGAGGTGGTCTACTCCACGTTCGACGAAGATCCCCTCCACCATATCCGCGCCGCCGAATTGGTGCTCAACCGCAGCAAGCGGCTGGTGGAAGTGGGAAAAGACGTCGTCATTTTGATGGACTCCATCACCCGTCTGGCGCGCGCCTACAACGTGACGGTCAACTCCTCGGGCAAGCTCCTCTCGGGCGGGCTGGATCCCGCCGCGCTTCCCGGCGCGAAGCGCATCATCGGGAGCGCGCGGAACATCGAGAACGGCGGAAGCCTGACCATCCTGTCCACCGCGCTGGTGGAGACCGGTTCGCGGATGGACGACGTCATCTACGAGGAATTCAAGGGCACGGGCAACATGGAGCTGCACCTCTCGCGGGAGCTCTCCGAAAAGCGCGTGTTCCCCGCGATCGACCTCTACAAATCCGGGACGCGGAAAGAAGAACTTCTCCTTTCGCCGAAAGAGCTGGACGCGGTCTTTAAAATCCGCCGCCTTCTCTCCGAGCGGCAGGATGCGAGCGAGAGCCTGATCTCCATGCTGCAGAAGACGAAGTCCAACGCGGATTTCGTTGAAAAAGTGGACAGCTGGCTGGAAATTTACAGAAAATAA
PROTEIN sequence
Length: 478
MKEFIPFTYEMLDKEHLSSIRELGRQIGVRSPSSLPKDELIDQIIRIQKGELSPVTASKRGAPPKIRVDISHFFREKTEERAEPKPDAQRGYRYRRQVPPIVRDHDALEIEGVLEQHVSGYGFLRVNNYENSKDDCYVSLQSIRQYNLRRGDKVRALARPNNEGAPALQQVLAINDCDPEVFRNRANFDDLVPYYPTERLKLEREDMEGDAAIRCVDLFCPVGKGQRGLIVAPPKTGKTTILKKIAQSIEKNHPEVKLFLLLIDERPEEVTDMKRSIQGEVVYSTFDEDPLHHIRAAELVLNRSKRLVEVGKDVVILMDSITRLARAYNVTVNSSGKLLSGGLDPAALPGAKRIIGSARNIENGGSLTILSTALVETGSRMDDVIYEEFKGTGNMELHLSRELSEKRVFPAIDLYKSGTRKEELLLSPKELDAVFKIRRLLSERQDASESLISMLQKTKSNADFVEKVDSWLEIYRK*