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L3_072_000M1_scaffold_855_19

Organism: dasL3_072_000M1_concoct_82_fa

near complete RP 49 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(21403..21957)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-70 (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 26.1
  • Coverage: 176.0
  • Bit_score: 94
  • Evalue 2.00e-17
RNA polymerase sigma factor n=1 Tax=Corallococcus sp. CAG:1435 RepID=R5VU55_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 39.0
  • Coverage: 177.0
  • Bit_score: 145
  • Evalue 4.50e-32
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1262867 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus; environmental samples.;" source="Corallococcus sp. CAG:1435.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.0
  • Coverage: 177.0
  • Bit_score: 145
  • Evalue 6.30e-32

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Taxonomy

Corallococcus sp. CAG:1435 → Corallococcus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
ATGCAGGAAGACGAGTTGAGAAAAATCAACAATTTCATACTGTACATTGCAAAGGGGCATCCACAGGCGCTGGAGGCCCTCTATGAAAATATCGGCGGCAGAATGCTGGCGGTGGCTTTTTCCATACTCCGGAACAGGCAGATGGCGGAGGACGCCGTGCAGGACAGTTTTCTGAAGATAGCGAAGAACGCCTCCCGTTTTGAACGGAATACCAACGGCGTCGCCTGGGTGATGCGGATCGTGCGAAACACCGCGCTCGACTATCTGAAGCGGGAGCGGAAGATTTCGACGGTGAACGTCGATGAGTGCTATGACCTGGGCCGTGACGATCCCATGCTCGAGCGATCGGAAAACGCCGTTCTGCTGGAACGCGCGCTGGCGCGGCTTCCGGAACAGGAGAGAAAGGTGATTTATTACCGCTATTATCTCGATTTTACGGTGCGGGATATCGCCAAAGAAACGGGGATTCCGAAATCGACGGTCATGCGGCTGATTCGGACAGCGGAAGAAAATTTGAAAAAAATGCTCTCGGACAGGGACAAAGACACCGTGTAA
PROTEIN sequence
Length: 185
MQEDELRKINNFILYIAKGHPQALEALYENIGGRMLAVAFSILRNRQMAEDAVQDSFLKIAKNASRFERNTNGVAWVMRIVRNTALDYLKRERKISTVNVDECYDLGRDDPMLERSENAVLLERALARLPEQERKVIYYRYYLDFTVRDIAKETGIPKSTVMRLIRTAEENLKKMLSDRDKDTV*