ggKbase home page

L3_072_000M1_scaffold_23823_6

Organism: dasL3_072_000M1_metabat_metabat_101_fa_fa

near complete RP 43 / 55 MC: 4 BSCG 47 / 51 ASCG 13 / 38 MC: 1
Location: 2528..3148

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 206.0
  • Bit_score: 397
  • Evalue 1.00e-107
tRNA pseudouridine synthase B n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LV22_9SPIR similarity UNIREF
DB: UNIREF100
  • Identity: 96.6
  • Coverage: 206.0
  • Bit_score: 397
  • Evalue 7.30e-108
pseudouridylate synthase similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 205.0
  • Bit_score: 277
  • Evalue 1.80e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Brachyspira sp. CAG:700 → Brachyspira → Brachyspirales → Spirochaetia → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 621
TTGAAATTTTCGGATAAAAAAAATATTTTAAGTTTTGCCGAACTTGAAAATATTATTAAGAAAAATTTTAACGGAAATATAATTCAAAAACCGCCGATTTATAGCGCAAAAAGAATTAACGGAAAACGAGCCTACAATATGGCAAGAGAAAATATTGATTTTGAAATTAAAAGCGTCAATGTTTGCGTAAACGATATAGAATTATTGGAATATAATTATCCTTTTTTTAAAATTAAAACTTCGGTTAGCAAAGGAACTTATATAAGAGCGATTATAAGAGATATTGGCGAGATAACGGGAAATTTTGCTTATACAAAAGAATTAATTAGAACGGCAATCGGAGATTTTAGTGTAGATAAAGCAAGCGATTTAAATAATATTTCAAGTAAAAATATATTGTCTTTTTTCGATATGTTTAAAAATATTGATAAAAAAATTATAGAAAACGAAAAAACTATAAAACAAATTTTTTGCGGAAATACAAAAATGATTGAGAATTTTGATTTTACTTATATAAAGAATAAATATTTAGCTTTGATTGATAAAAATAATAATTTAATCGCGTTAATAGAAAAAGAAAATATAAACGGAAAAAATATATTTGCATTTATTAATTCGTAA
PROTEIN sequence
Length: 207
LKFSDKKNILSFAELENIIKKNFNGNIIQKPPIYSAKRINGKRAYNMARENIDFEIKSVNVCVNDIELLEYNYPFFKIKTSVSKGTYIRAIIRDIGEITGNFAYTKELIRTAIGDFSVDKASDLNNISSKNILSFFDMFKNIDKKIIENEKTIKQIFCGNTKMIENFDFTYIKNKYLALIDKNNNLIALIEKENINGKNIFAFINS*