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L3_072_362G1_public_UNK

In projects: L3_072_362G1_public

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 159.08 Longest contig: 437.21 Kbp Bin length: 83.90 Mbp GC content: 44.58 %
Contigs count: 15582 Features count: 89846 rRNAs count: 16 tRNAs count: 1297

Genome completeness

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 15
Displaying items 15301-15350 of 15582 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L3_072_362G1_scaffold_7206
Species: Burkholderiales bacterium 1_1_47 (100%)
3 1797 bp 49.58 6.01 100.67
L3_072_362G1_scaffold_10622
Species: Roseburia inulinivorans CAG:15 (50%)
2 1344 bp 44.79 4.13 100.67
L3_072_362G1_scaffold_10626
Species: GWC2_OD1_34_16_partial (50%)
2 1344 bp 24.40 4.02 100.67
L3_072_362G1_scaffold_10760
Species: [Ruminococcus] torques (50%)
2 1332 bp 39.11 6.08 100.68
L3_072_362G1_scaffold_6089
Species: Parasutterella excrementihominis CAG:233 (100%)
4 2065 bp 51.23 5.38 100.68
L3_072_362G1_scaffold_10820
Species: Peptoclostridium difficile (50%)
2 1326 bp 46.68 4.07 100.68
L3_072_362G1_scaffold_15273
Species: Enterococcus gallinarum (100%)
2 1031 bp 43.55 2.04 100.68
L3_072_362G1_scaffold_15280
Species: Coprobacillus sp. 8_2_54BFAA (100%)
2 1031 bp 30.94 2.76 100.68
L3_072_362G1_scaffold_10870
Species: Lachnospiraceae bacterium 3_1_46FAA (50%)
2 1323 bp 38.85 4.31 100.68
L3_072_362G1_scaffold_9440
Species: [Clostridium] innocuum (100%)
2 1463 bp 45.73 4.61 100.68
L3_072_362G1_scaffold_15495
Species: Coprobacillus sp. 8_2_54BFAA (50%)
2 1019 bp 31.89 3.24 100.69
L3_072_362G1_scaffold_15499
Species: Anaerostipes sp. CAG:276 (50%)
2 1019 bp 46.71 4.71 100.69
L3_072_362G1_scaffold_6396
Genus: Veillonella (100%)
3 2580 bp 40.50 283.37 100.70
L3_072_362G1_scaffold_9715
Species: Clostridium sp. HGF2 (50%)
2 1433 bp 47.52 4.29 100.70
L3_072_362G1_scaffold_7717
Species: Lactobacillus reuteri (100%)
2 1710 bp 40.00 4.04 100.70
L3_072_362G1_scaffold_11472
Species: Anaerostipes sp. CAG:276 (100%)
2 1269 bp 46.49 5.20 100.71
L3_072_362G1_scaffold_3479
Species: Escherichia coli (85.71%)
7 3521 bp 53.71 24.28 100.71
L3_072_362G1_scaffold_13524
Species: Eubacterium dolichum CAG:375 (50%)
2 1126 bp 39.79 2.66 100.71
L3_072_362G1_scaffold_13539
Species: [Eubacterium] dolichum (50%)
2 1126 bp 43.16 4.93 100.71
L3_072_362G1_scaffold_11603
Genus: Lactobacillus (100%)
3 1257 bp 42.00 4.65 100.72
L3_072_362G1_scaffold_7144
Species: Pasteurella bettyae (100%)
2 1808 bp 44.47 3.90 100.72
L3_072_362G1_scaffold_7961
Species: Firmicutes bacterium CAG:227 (50%)
2 1668 bp 49.10 2.88 100.72
L3_072_362G1_scaffold_6530
Species: Parasutterella excrementihominis CAG:233 (66.67%)
3 1945 bp 50.69 4.55 100.72
L3_072_362G1_scaffold_10222
Species: Veillonella parvula (66.67%)
3 1379 bp 43.00 67.22 100.73
L3_072_362G1_scaffold_13956
Species: Escherichia coli (100%)
3 1099 bp 59.33 5.60 100.73
L3_072_362G1_scaffold_14200
Species: Erysipelotrichaceae bacterium CAG:64 (50%)
2 1087 bp 47.47 3.86 100.74
L3_072_362G1_scaffold_7586
Species: Clostridium bornimense (50%)
2 1730 bp 27.92 4.34 100.75
L3_072_362G1_scaffold_12409
Species: Anaerostipes sp. CAG:276 (50%)
2 1197 bp 45.95 3.26 100.75
L3_072_362G1_scaffold_4447
Species: Parasutterella excrementihominis CAG:233 (100%)
4 2733 bp 51.04 4.83 100.77
L3_072_362G1_scaffold_11109
Species: Clostridium baratii (50%)
2 1301 bp 30.21 3.69 100.77
L3_072_362G1_scaffold_12948
Species: Streptococcus sp. C150 (50%)
2 1164 bp 41.67 4.51 100.77
L3_072_362G1_scaffold_9851
Species: Parasutterella excrementihominis CAG:233 (66.67%)
3 1420 bp 49.86 5.18 100.77
L3_072_362G1_scaffold_15297
Species: Coprobacillus sp. CAG:183 (100%)
2 1030 bp 30.78 4.22 100.78
L3_072_362G1_scaffold_7199
Order: Erysipelotrichales (66.67%)
3 1798 bp 47.83 4.00 100.78
L3_072_362G1_scaffold_15348
Species: [Clostridium] celerecrescens (50%)
2 1027 bp 38.17 4.53 100.78
L3_072_362G1_scaffold_11370
Species: Clostridium perfringens (100%)
2 1277 bp 30.93 4.23 100.78
L3_072_362G1_scaffold_13164
Species: Clostridium sp. MSTE9 (100%)
3 1149 bp 49.78 2.61 100.78
L3_072_362G1_scaffold_11556
Species: Anaerostipes sp. 3_2_56FAA (50%)
2 1262 bp 48.34 4.40 100.79
L3_072_362G1_scaffold_11917
Species: Veillonella sp. 3_1_44 (50%)
2 1235 bp 46.88 267.81 100.81
L3_072_362G1_scaffold_9319
Species: Lactobacillus reuteri (100%)
2 1479 bp 40.23 3.04 100.81
L3_072_362G1_scaffold_8402
Species: Escherichia coli (50%)
2 1601 bp 50.97 3.75 100.81
L3_072_362G1_scaffold_5650
Genus: Veillonella (66.67%)
3 2193 bp 40.63 11.49 100.82
L3_072_362G1_scaffold_12232
Species: Actinomyces sp. S6-Spd3 (50%)
2 1211 bp 56.73 2.73 100.83
L3_072_362G1_scaffold_7845
Order: Erysipelotrichales (60%)
5 1687 bp 47.30 4.80 100.83
L3_072_362G1_scaffold_5757
Species: Bifidobacterium longum (83.33%)
6 4692 bp 54.07 416.72 100.83
L3_072_362G1_scaffold_9095
Genus: Veillonella (66.67%)
3 2374 bp 40.06 238.96 100.84
L3_072_362G1_scaffold_12576
Species: Clostridium sulfidigenes (66.67%)
3 1187 bp 33.11 2.02 100.84
L3_072_362G1_scaffold_4034
Species: Veillonella parvula (50%)
2 4034 bp 42.04 311.82 100.84
L3_072_362G1_scaffold_11274
Species: Eubacterium dolichum CAG:375 (66.67%)
3 1285 bp 39.22 3.04 100.86
L3_072_362G1_scaffold_14915
Species: Coprobacillus sp. CAG:183 (100%)
2 1047 bp 33.24 4.87 100.86
Displaying items 15301-15350 of 15582 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.