ggKbase home page

L3_079_000M1_scaffold_20_23

Organism: L3_079_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 15
Location: comp(16706..17671)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase n=1 Tax=Roseburia sp. CAG:18 RepID=R5UJ14_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 321.0
  • Bit_score: 640
  • Evalue 7.80e-181
Pseudouridine synthase {ECO:0000313|EMBL:CCZ78263.1}; TaxID=1262941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:18.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 321.0
  • Bit_score: 640
  • Evalue 1.10e-180
RluA family pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 319.0
  • Bit_score: 336
  • Evalue 5.20e-90

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Roseburia sp. CAG:18 → Roseburia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 966
ATGAAAACATTTACCATCGGCACGAATGATGCCAACCAGCGGTTTGATAAATATTTAAAAAAACTGCTGCCCAATGCATCGGTCAGTTTTTTATATAAGATGCTTCGAAAAAAGAATATTACTTTGGACGGAAAAAAAGCGACCGGGAAGGAGACGCTGCAAAAAGGCGCGCAGGTAGCGGTGTTTTTCAGTGATGAAACACTGCATAAATTTATGCAGGATACAAAAAAACTGCAGGAAGAGTTTCACATGCTGCAGCGTCTGCCAATGAAGGGGCTTTCCATCATTTATGAAGATACGGATATTCTCATCGCGGATAAGCCATACAATATGCTTTCCCAGAAAGCAAAAGAACAGGATCTGTCTGCCAATGAATATCTGCTCGGCTATCTGATCCGGAGCGGGGCACTTTCTCTGGAGACATTCGGCACGTTTCGTCCGTCAGTGTGCAACCGGCTGGACCGCAATACGACAGGACTTCTTCTGATGGGCAAAACGCTTGCCGGCGCACAGATGCTTTCCGAGGGGCTGCGGGAACGTACCATTCATAAATTTTACCGTGCCATTGTATCCGGGAACGTTACAAAACCGGTACATCTGTCCGGATGGCTTATCAAAGACGAACATACCAATCAGGTAAAGATTCTGACACAGGAACAAAAAGATGCTGTACGGATTGAGACTTCTTATACGTCCGTACAGACGAAAGGAACATGCAGTCTGTTGGAAATCTGCCTGATTACCGGAAAAACACATCAGATTCGTGCACATCTGGCATCTGTCGGTCATCCGGTTATCGGAGATCGCAAGTATGGGGACCCGTCAGTGAATCACAAATTTTATGGTACCTTTCATGTGGATCATCAGCTGCTTCATGCGTATCGTCTGGAATTTCCGGACGGAAGAGTTTTTACTGCTCCGATGCCCGAAATATTTAAAGAAATTATGGAAAAGGAGCGTGGATAG
PROTEIN sequence
Length: 322
MKTFTIGTNDANQRFDKYLKKLLPNASVSFLYKMLRKKNITLDGKKATGKETLQKGAQVAVFFSDETLHKFMQDTKKLQEEFHMLQRLPMKGLSIIYEDTDILIADKPYNMLSQKAKEQDLSANEYLLGYLIRSGALSLETFGTFRPSVCNRLDRNTTGLLLMGKTLAGAQMLSEGLRERTIHKFYRAIVSGNVTKPVHLSGWLIKDEHTNQVKILTQEQKDAVRIETSYTSVQTKGTCSLLEICLITGKTHQIRAHLASVGHPVIGDRKYGDPSVNHKFYGTFHVDHQLLHAYRLEFPDGRVFTAPMPEIFKEIMEKERG*