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L3_079_000M1_scaffold_115_24

Organism: L3_079_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 15
Location: comp(27007..30537)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.9
  • Coverage: 1175.0
  • Bit_score: 1979
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Roseburia sp. CAG:197 RepID=R5YC30_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 82.9
  • Coverage: 1175.0
  • Bit_score: 1979
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 1171.0
  • Bit_score: 1785
  • Evalue 0.0

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Taxonomy

Roseburia sp. CAG:197 → Roseburia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3531
GTGAAAGCATTTATAGAACCGCTGCAGGAATTGAGCGGATATGAAGATATGACAAAAGCGGCCATGCAGCCGGGACTGGTGACCATCAGTGGCTGTATTGATGCACAGAAGCCACATATGATTTACACGCTTGGAAGGACACGCAGCCGGCGTCTGATCGTAACGTTTCATGAGCAGAAAGCGAAAGAATTGTATGACGACTATCGTTTTTTTGATCCATCAGTGGTGTATTATCCGGCAAAGGATGTGCTGTTTTATCAATCGGATATCCGCGGAAACCTTCTTACCGCAGAGCGGATCAGTGCATTGCGGGCAATTCATGAAAATGAACAGGTGACGGTGATCACAACATTTGATGCCCTGATGAATACGATGCCAAGGGATGCACAGGTGTGGGACAGTGTGCTGCATATTGCACAGGGAGATACCCTGGATCTGGATGCACTTGTGGAACAGCTGGTGCGGATGGGATATGAACGGCAGTATCAGGTGGATAATATCGGTCAGTTTGCATTAAGAGGTGGAATTCTTGATATTTTTCCGCTGACGGAAGAAAATCCGATCCGGATTGAGCTGTGGGATGATGAAGTAGATACCCTTCGCACCTTTGATGTGGAAAGTCAGAAATCTATTGAAAATATAGAAAAGCTTGTGGTATATCCGGCATGTGAACTGGTTCTTTCGACTGAAGAGAAAGCAGAAGGTATCCGCAGACTGTTAAAGGAAGCAGAAGCTTTTTCCGATAAATTGCGGAAAGAAATGAAAACCGAGGAAGCCTATCGGGCACTGTCACAGGCAAAAGAACTGGCACAGGAATGGGAAGAATTGTCGGAAACCGCGGGAATGGATGCTTTTTTGTCCTATTTCTGCAGGGAACGGTGGAGCCTTCTGGATTATTTTGATCCGGCAGATACATTTGTGTTTTTCGATGAGCTGAGCCGGAGCGCGGAACGCGGACGGCAGACGGAACTGGAATTTTCGGAGAGCATGAAGCAGCGTCTGGAAATGGGGTATATTCTGCCGGGGCAGATGAACGAACTGTTTGGCTATAAGGAAATCATGGGAAGGCTTGAAAAATATTCCTGCTGTGCGGTTTCCGCACTGGATATCAAGACCTGCGGATTAAAATCCAATGGGCAGTTCGGCATTCATGTAAAGAGCGTAAGCGCATACAATAACAGCTTTGAACTTCTGATCGCAGACCTGAAGAAATACAAAAAAAACGGATACCGTATTATTTTACTTTCCGGTTCCCGCACACGCGCGAAGCGTCTGGCGGAGGATATTTTAAACGAAGGACTCAACTGTTTTTATACGGAAGATTACGATCACGATCTGGTGGCAGGACAGATCATGGTCTGCTACGGAAAAGTGCATCAGGGGTATGAATATCCGATCCTGCAGTTTGCAGTGATTACGGATACGGATATTTTCGGGGAAGAAAAAAAGAAAAAGAAGCGGCACCGCACCTATGAGGGCGAAAAAATCCAGCAGTTTACGGATCTGAGTGTCGGGGATTATGTCGTACATGAAAATCATGGGCTTGGTATCTACAAAGGAATTGAAAAGATAGAAGTCGACCGAAAGGTGAAAGATTACATCAAGATCGAATATGCGGGAGGCTCCAATCTGTATATTCTTGCAACACAGCTTGACCAGATCCAGAAATATGCGGGGAAAGACGCAAGAAAACCAAAACTCAATAAACTTGGAAGCCAGGAGTGGACAAAAACCAAGGGAAAAGTGCGTGGAGCCGTGCGTCAGATCGCACAGGATCTGGTGAAATTATATGCCGAGCGGGAAGAACAGAATGGCTATATGTATGGACCGGATACGGTATGGCAGAGAGAGTTTGAAGAACTGTTCCCGTTTGAAGAGACCGAAGATCAGGTGCTTGCCATTGATGCAACCAAGCGGGATATGGAGAGCCATAAGATTATGGACCGGCTGATCTGCGGGGATGTCGGTTACGGAAAGACGGAGATTGCGATCCGTGCAGCTTTCAAAGCAGTGCAGGAGAATAAACAGGTGGCATACCTTGCGCCGACAACCATTCTTGCCCAGCAGATTTATAATACGTTTTCCCAGAGAATGAAGGATTTCCCTGTCCGGGTGGATCTGTTGTGCCGTTTCCGCACGGCAGCGCAGCAGAAGAAGACCATCAGTGATCTGAAAAAAGGACAGGTGGATATTATTGTGGGAACACACCGGATTCTGTCAAAAGATGTGCAGTTTAAAGATCTTGGGCTTCTTGTCGTGGACGAGGAACAACGGTTTGGTGTGGCTCACAAAGAAAAAATCAAACAGTTAAAGACCAATGTGGATGTGCTGACACTTACTGCCACACCGATTCCGCGGACACTTCACATGAGCCTGATCGGAATTCGGGATATGAGCGTTTTAGAGGAACCGCCGATGGACCGTGTCCCGATTCAGACGTATGTCATGGAATATAATGAGGAACTGGTCCGGGAGGCAATCACGCGGGAACTTGCCCGTGGCGGACAGGTATATTATGTGTATAACAAAGTAAGGGATATTGATGAAGTGACGTCACGCATTCAGGAGCTGGTGCCGGAGGCAAATGTGGCATTTGCTCATGGACAGATGAGAGAAAACCAGCTGGAGGATATCATGTACCGGTTTATCAATGGAGACATTGATGTACTGGTATCAACGACAATCATAGAGACGGGACTGGATATCTCAAATGTCAATACCATGATTATTCATGACGCGGATAATATGGGGCTTTCCCAGCTGTATCAGCTGCGCGGGCGGGTCGGCAGATCCAATCGTACGGCGTATGCATTTCTTATGTACCGCAGAAACAAAATGCTCAAAGAGGTGGCGGAAAAACGACTGGCTGCCATCCGGGAGTATTCGGATCTGGGCAGCGGATTTAAGATTGCCATGCGGGACCTGGAGATCCGGGGAGCCGGAAATCTGCTGGGAGCCGAACAGAGCGGTCACATGGAGGCGGTTGGATATGATCTGTACTGCAAGATGCTTCACGAAGCGGTGAAAGAAGCCCGGGGAGAAGCACCGGCCGAACAGTTTGAGACTTCCGTTGATATCCGGACGGATGCATTTATTCCGTCCACATATATTGCAAATGAGTCGCAGAAACTGGATATGTATAAGCGGATCGCCGGAATTGAAACGGATGAGGAAGCGGAGGAAATGCTCGAAGAACTGATTGACCGTTTTGGAGAGCCTCCGAAGTCCGTGCAGAATCTGCTGACAATTGCCAGACTCAAAGCGGTTGCCCACAGTGTATATATTAAGGAAATTGTTCAAAGAGAAGATCTGTTAAAAATCCTAATGTACGAAAAAGCAAAGATTCACGCACAGCGTATTCCGGAGCTGGTAAAAACATTTGCTCCATCACTGAAATTTGCGGCAGATCCGAAGGGACCGTACTTCACTTACCGTCTGGGAGCAAATTCAAGGGAAAAGAACAGGGAAATTCTGGAAGTTCTCAGGCAATTATTGGAACAAATGCACGTTTTTTTGTGTGCGGAGCCGTAA
PROTEIN sequence
Length: 1177
VKAFIEPLQELSGYEDMTKAAMQPGLVTISGCIDAQKPHMIYTLGRTRSRRLIVTFHEQKAKELYDDYRFFDPSVVYYPAKDVLFYQSDIRGNLLTAERISALRAIHENEQVTVITTFDALMNTMPRDAQVWDSVLHIAQGDTLDLDALVEQLVRMGYERQYQVDNIGQFALRGGILDIFPLTEENPIRIELWDDEVDTLRTFDVESQKSIENIEKLVVYPACELVLSTEEKAEGIRRLLKEAEAFSDKLRKEMKTEEAYRALSQAKELAQEWEELSETAGMDAFLSYFCRERWSLLDYFDPADTFVFFDELSRSAERGRQTELEFSESMKQRLEMGYILPGQMNELFGYKEIMGRLEKYSCCAVSALDIKTCGLKSNGQFGIHVKSVSAYNNSFELLIADLKKYKKNGYRIILLSGSRTRAKRLAEDILNEGLNCFYTEDYDHDLVAGQIMVCYGKVHQGYEYPILQFAVITDTDIFGEEKKKKKRHRTYEGEKIQQFTDLSVGDYVVHENHGLGIYKGIEKIEVDRKVKDYIKIEYAGGSNLYILATQLDQIQKYAGKDARKPKLNKLGSQEWTKTKGKVRGAVRQIAQDLVKLYAEREEQNGYMYGPDTVWQREFEELFPFEETEDQVLAIDATKRDMESHKIMDRLICGDVGYGKTEIAIRAAFKAVQENKQVAYLAPTTILAQQIYNTFSQRMKDFPVRVDLLCRFRTAAQQKKTISDLKKGQVDIIVGTHRILSKDVQFKDLGLLVVDEEQRFGVAHKEKIKQLKTNVDVLTLTATPIPRTLHMSLIGIRDMSVLEEPPMDRVPIQTYVMEYNEELVREAITRELARGGQVYYVYNKVRDIDEVTSRIQELVPEANVAFAHGQMRENQLEDIMYRFINGDIDVLVSTTIIETGLDISNVNTMIIHDADNMGLSQLYQLRGRVGRSNRTAYAFLMYRRNKMLKEVAEKRLAAIREYSDLGSGFKIAMRDLEIRGAGNLLGAEQSGHMEAVGYDLYCKMLHEAVKEARGEAPAEQFETSVDIRTDAFIPSTYIANESQKLDMYKRIAGIETDEEAEEMLEELIDRFGEPPKSVQNLLTIARLKAVAHSVYIKEIVQREDLLKILMYEKAKIHAQRIPELVKTFAPSLKFAADPKGPYFTYRLGANSREKNREILEVLRQLLEQMHVFLCAEP*