ggKbase home page

L3_079_000M1_scaffold_528_24

Organism: L3_079_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 15
Location: comp(24350..24889)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZKE3_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 171.0
  • Bit_score: 344
  • Evalue 6.40e-92
Sigma-70 region 2 {ECO:0000313|EMBL:EFQ06342.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 171.0
  • Bit_score: 344
  • Evalue 9.00e-92
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 176.0
  • Bit_score: 301
  • Evalue 1.00e-79

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Faecalibacterium prausnitzii → Faecalibacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 540
TTGACGACCTTGGAATTCAGCGCGATGGTGCAAAAATACCAGTCGCTCGTATATACGGTCTGCCACCAGCTGGTGCCGGATGCCGGCGATGCGCAGGACCTGACGCAGGAGACCTTTCTGGCGGCATGGCGGGCCATTGACCGCTGCCCGTCCGGGTTTGAAAAACAGTGGCTGGCACGCATCGCTGCCAACAAGGCAAAGGACTATCTGCGCAGCGCATGGGTGCGCAGGGTGAACATTCCCGGCGACGATGTGCTGGCGCTGGAAGGTGCGCCGCCCGGCACCCAGCCGGAACAGCAGGTGCTGGATGCTCTGGGCGAGGAAGAGCTCACCGCCATGATCCTGGACCTGCGGGAGCCCTACAGAACGCCTTGCCGTCTGGTGCTGCTGGAGCAGCACACCATGGCCGAGGCGGCACAGCTGTGCGGCCGCCCGCCCAAGACGGTGGAAGCACAGATCTACCGGGCAAAAAAGATGCTGGCACAGCAGATACTACAGTGTGAAAACGATGGAAAGGAGTGCGTACATGGAACTGTTTGA
PROTEIN sequence
Length: 180
LTTLEFSAMVQKYQSLVYTVCHQLVPDAGDAQDLTQETFLAAWRAIDRCPSGFEKQWLARIAANKAKDYLRSAWVRRVNIPGDDVLALEGAPPGTQPEQQVLDALGEEELTAMILDLREPYRTPCRLVLLEQHTMAEAAQLCGRPPKTVEAQIYRAKKMLAQQILQCENDGKECVHGTV*