ggKbase home page

L3_079_000M1_scaffold_27326_2

Organism: L3_079_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 15
Location: 858..1271

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJ45_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 91.2
  • Coverage: 137.0
  • Bit_score: 257
  • Evalue 4.60e-66
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EFB77205.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 137.0
  • Bit_score: 257
  • Evalue 6.50e-66
Sigma-70, region 4. similarity KEGG
DB: KEGG
  • Identity: 91.2
  • Coverage: 137.0
  • Bit_score: 253
  • Evalue 2.50e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Subdoligranulum variabile → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 414
ATGAAAAAAGTCAATCTCCGGGATCTGTATCCCGATATTTATAAAATCGATCACTTTGTAGAAGTAACCGAAGATGTGCTGGAGGCGATCCGTGACGCTGAGCGTGCAGAAGCTGCCTATGACCGGAGAATGTATCGCTATAAGGCATACTACTCCCTGGACTGCGACAACGGTATTGAGAATGCTATCCTGCTGAAACCTCAGACACCAGAAATGATTTTGGAGGAAGAACAGCTGCGGGAGAAGCTCTATGCCGCTGTGATGACTCTGCCGGAGAAGCAAGCTAAGCGAATCTATGCCCGGTATTACCTGGGTATGCGTGTGAGTGAAATTGCCTCGGCGGAGGGTGTAGATCCAAGCCGTGTCCGAGACAGTATCCGGCGTGGGTTGAAACAGCTGACAAAGTATTTTTGA
PROTEIN sequence
Length: 138
MKKVNLRDLYPDIYKIDHFVEVTEDVLEAIRDAERAEAAYDRRMYRYKAYYSLDCDNGIENAILLKPQTPEMILEEEQLREKLYAAVMTLPEKQAKRIYARYYLGMRVSEIASAEGVDPSRVRDSIRRGLKQLTKYF*