ggKbase home page

L3_079_000M1_scaffold_31631_2

Organism: L3_079_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 15
Location: comp(413..1015)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=5 Tax=Clostridiales RepID=D4JJ27_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 177.0
  • Bit_score: 353
  • Evalue 1.20e-94
Sigma-70 region 2 {ECO:0000313|EMBL:EEU98626.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 189.0
  • Bit_score: 379
  • Evalue 1.70e-102
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 177.0
  • Bit_score: 353
  • Evalue 3.30e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Roseburia intestinalis → Roseburia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 603
ATGTGCAAGAATAAATTTACTTGCTCACTTAGAATGGATGGCTGCAGGGCTATCCATGAGGAAACTTATATGATGATACTCCTATTTAGTGTTTTGAATGATGAACAACGTGCGCTGGTAGAGCGGATATTCCATGAGCATCATATCCACTTCCAGCGCATTTCGTTTAATATTGTGAAGTCAGAGGAAGCCGCAGAGGATGTCGTGTCCACTGCATTTATAAAAATCATGGACAACATCGAAAAAATTTCTGATTTACCCTGTCCCCAAATGACCGCTTTCTGCGTTACCATAGTGAAAAATGCTTCTATTGACGTACTACGTCAATTACAACAGAGTGTTCACATTGATTACTGGGACAATATTTCGGACGAGGACACGGACGATATTGAAGATGAATGTATTCACAATGCAGATGTACATAGGCTGACTGAGGTAATAGATCAGCTTTATCCCGATGATCGGCATTTTATCTATCTTCGCTATACGCTGGAAATGGGATATAGAGAGATTGGTGAATTGCTGAACATTTCGGAGGATGCCGCAAAAAAACGTGGGCAGCGGCTCGTCAAGAAGCTCCAAAAACTGTATGAGGAAAGGTGA
PROTEIN sequence
Length: 201
MCKNKFTCSLRMDGCRAIHEETYMMILLFSVLNDEQRALVERIFHEHHIHFQRISFNIVKSEEAAEDVVSTAFIKIMDNIEKISDLPCPQMTAFCVTIVKNASIDVLRQLQQSVHIDYWDNISDEDTDDIEDECIHNADVHRLTEVIDQLYPDDRHFIYLRYTLEMGYREIGELLNISEDAAKKRGQRLVKKLQKLYEER*