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L3_079_000M1_scaffold_774_11

Organism: dasL3_079_000M1_metabat_metabat_47_fa_fa

near complete RP 47 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 2
Location: comp(9840..13220)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.9
  • Coverage: 1126.0
  • Bit_score: 2224
  • Evalue 0.0
transcription-repair coupling factor (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 69.9
  • Coverage: 1115.0
  • Bit_score: 1562
  • Evalue 0.0
Transcription-repair-coupling factor n=2 Tax=Dorea RepID=A6BI00_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.9
  • Coverage: 1126.0
  • Bit_score: 2224
  • Evalue 0.0

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Taxonomy

Dorea longicatena → Dorea → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3381
ATGCAGGGCTTAATCGGGCCGTTAAAAGAACTGGCAGAGTTTGAAGAACTCTGCAAGAATAAGAAAAAAGATGTGGGAATGATCCGTGTGTGCGGATGTGTGAATTCCCAGAAATCTCATATGATGTATGCACTTGGCGATGGCTGTAAATATAAAGTCATCGCCTGTTCCAGTGAGACAAAAGCAAAACAAATCTATGAAGAATACCGTTTCCTGGACAGTAATACGTATCTGTATCCGGCGAAAGATTTTCTCTTCTATCAGGCAGATATCCGAAGTAAAGAACTGGTAAAGCAGAGAATGGAAGGAATCCAGGCAGTGCTTTCGGGTGAACCGGTAACGGTTGTGACAAGCCTGGACGGCTTCATGGATCATCTGGCACCGAAGGAAAGTATTGCGGAAAAAGTACTTAAGGTACAAAATGACAGCGTTCTCAAATTGGATGAGATGGCAGAGAAGCTTTCGGTTATAGGTTATGACCGGGAAGTGCAGGTGGAAGGACCTGGACAGTTTGCGGTACGTGGAGGAATCCTGGATATCTATCCGCTGACGGAAGAACTTCCGGTGCGTATCGAACTCTGGGGAGATGAGGTGGATTCCATCCGTACGTTTGATGTGGAGAGCCAGCGGTCGATCGAAAATCTGATGGATATTGTAATCTATCCGGCGGTAGAATTCCCACAGAATGGTGAGAAGGGTGTCTCGTTTCTGGATTATTTTCCACCGGAGGATACGATCCTTTTTCTGGATGAACCGGTACGTCTTGTGGAGCATGGACAGAATATTGAAGATGAATTCATGGAAGCACAGAAGAAACGTCTGGAAAGCGGATATGATTTGGAAGAGGAAGAAGCAAAAATCTTTCCGGTCACTGAGATCCTGAAAAAGATCAATTGTTACAGTAGTATCGGATTCTATGCACTGGGGATGAAATGCAAAGGACTGGAGGTGAGAGAGTCTTATGAGATCCAGGCGAAAAGTGTGAATCCGTATAATAACAGTTTTGAAATGCTGACACAGGATCTGAAACGGTTAAAAAGAAATGGATACAGGGTAATTCTGTTGTCAGGTTCCAGGACCCGTGCGAAGCGTCTGGCGGAAGATTTAAGAGATTATAATCTGAGCAGTTATTACAGTGAAGATCTGGACCGGGAAGTGAAGCCGGGAGAGATCATGACGGCATACGGATATATCGCAGAAGGTTATGAATATCCGATGCTCAAATTCACTGTGATCGCAGAGTCGGACATTTTCGGCAAACGGAAAAAGAAGAAAAAGAGAAAGACATATGAAGGCCGTAAGATCCAGAGCTTTTCGGAACTGAAACCGGGAGACTATGTGGTCCATGAGAATCATGGTGTCGGGGTCTATCAGGGGATCGAGAAGATCGTCGTAGACAAGATTTCGAAGGATTATATGAAAATTTCGTATGCACAGGGCGGAAATCTTTATATCCCGGCAACGCAGCTGGATCTGATCCAGAAATATGCAAGTGCCGATGCCAAGAAACCGAAACTGAACAAGTTGGGAACGCAGGAATGGAACCGGACCAAGACAAAGGTGCGCGGTGCGGTAAAAGAGATTGCAAGGGATCTGGTGAAGCTGTATGCGGCGAGACAGGAACAGGATGGTTATGTCTATGGAGAAGATACTGTCTGGCAGCGGGAATTTGAAGAGATGTTCCCGTTTGAAGAGACAGAAGACCAGATGATGGCGATCGAGGCTGTGAAAAAAGATATGGAAAGTCACAAGATCATGGACCGTCTGGTCTGTGGCGATGTCGGATTCGGAAAAACAGAAGTTGCGATCCGTGCGGCATTCAAAGCAGTACAGGAGAGTAAACAGGTGGTCTATCTGGTTCCGACAACAATCCTTGCACAGCAGCATTACCGGACGTTCGTGCAGCGTATGAAAGACTTTCCGGTGCGGATCGATCTGATGTGCAGATTCCGCACGCCGGCGCAGCAGAAGAAGACAGTCGAGGATGCGAAAAAGGGGCTGGTAGATATTATCATCGGAACACACCGAGTGTTAAGTGAAGATATGAAATTCAAGGATCTCGGGCTTCTGATCATTGATGAAGAGCAGAGATTCGGAGTACAGCACAAAGAGAAAATCAAGAAATTAAAGGAAAATGTAGATGTACTGACGCTTACGGCAACTCCGATCCCGAGAACCCTTCATATGAGCCTGATCGGAATCCGTGACATGAGTGTGCTGGAAGAAGCGCCGAACGACCGTATGCCGATCCAGACGTATGTCATGGAATATAACGATGAGATGGTACGTGAGGCAATTGAACGGGAATGCGCAAGACAGGGACAGGTATATTATGTCTACAACCGCGTGGAAGATATTGATGAAGTGGCAGGACATGTGCAGAAACTGGTGCCGGATCTGACGGTTGCCTATGCACACGGACAGATGCGGGAACACGAACTGGAACGGATTATGTATGATTTCATTAATGGTGAGATTGATGTACTGGTATCTACAACGATCATAGAGACAGGACTGGATATTTCCAATGCGAATACGATGATCATCCACGATGCGGATCGTCTCGGCCTTTCACAGCTTTATCAGCTGCGTGGGCGTGTCGGACGCTCTAACCGCATGGCATATGCATTCCTTCTATACCGGAGAGACAAGATGTTAAAAGAAGTGGCTGAAAAGAGACTGGCGGCCATCCGCGAGTTTACGGATCTTGGTTCGGGATTCAAGATCGCAATGCGGGATCTTGAGATCCGCGGAGCAGGCAATCTTCTAGGAGCAGAACAGCATGGACATATGGAAGCAGTCGGATATGACCTTTACTGTAAGATGCTGAACGAGGCGGTGAAGCAGCTGAAAGGCGAGATGGAAGAAGAGGAGACATTTACAACGACGATGGATCTGAATGTGGATGCATTTATTCCAGCCTCGTATATTCCGAATGAATATCAGAAACTGGATGTTTATAAACGGATCGCTGCAATCGAGAACAGAGAAGAGATGGAAGATATGACAGAAGAACTGATCGACCGTTTCGGAGATATTCCGAAGAAAGTAGAAAAGCTTCTGGAAGTAGCGGCTCTGAAGGCACAGGCACATCAGTTGTATGTAACGGCGGTCGAGCAGAAAGGCGAGGTTTACACATTTACCATGTATGAAAAAGCAAAAGTACATCCGGAGCGGATTCCGAAGCTGATTGAAGATTTTCGTGGCGAGCTGACGTTCAAAGCGGATGGGGTGCAGCCATGTTTTATCTATGAGAAGAAGAGAAGGAATCTGAAAGAGAAGCAGACAGACGCATTGGAAAGTACAAAAAATGTGTTAAATGGGTTGAAAAGATTGATAGGCGAAGAAAAAAGCGGTATAATTGACCCATTAAGCAAATAA
PROTEIN sequence
Length: 1127
MQGLIGPLKELAEFEELCKNKKKDVGMIRVCGCVNSQKSHMMYALGDGCKYKVIACSSETKAKQIYEEYRFLDSNTYLYPAKDFLFYQADIRSKELVKQRMEGIQAVLSGEPVTVVTSLDGFMDHLAPKESIAEKVLKVQNDSVLKLDEMAEKLSVIGYDREVQVEGPGQFAVRGGILDIYPLTEELPVRIELWGDEVDSIRTFDVESQRSIENLMDIVIYPAVEFPQNGEKGVSFLDYFPPEDTILFLDEPVRLVEHGQNIEDEFMEAQKKRLESGYDLEEEEAKIFPVTEILKKINCYSSIGFYALGMKCKGLEVRESYEIQAKSVNPYNNSFEMLTQDLKRLKRNGYRVILLSGSRTRAKRLAEDLRDYNLSSYYSEDLDREVKPGEIMTAYGYIAEGYEYPMLKFTVIAESDIFGKRKKKKKRKTYEGRKIQSFSELKPGDYVVHENHGVGVYQGIEKIVVDKISKDYMKISYAQGGNLYIPATQLDLIQKYASADAKKPKLNKLGTQEWNRTKTKVRGAVKEIARDLVKLYAARQEQDGYVYGEDTVWQREFEEMFPFEETEDQMMAIEAVKKDMESHKIMDRLVCGDVGFGKTEVAIRAAFKAVQESKQVVYLVPTTILAQQHYRTFVQRMKDFPVRIDLMCRFRTPAQQKKTVEDAKKGLVDIIIGTHRVLSEDMKFKDLGLLIIDEEQRFGVQHKEKIKKLKENVDVLTLTATPIPRTLHMSLIGIRDMSVLEEAPNDRMPIQTYVMEYNDEMVREAIERECARQGQVYYVYNRVEDIDEVAGHVQKLVPDLTVAYAHGQMREHELERIMYDFINGEIDVLVSTTIIETGLDISNANTMIIHDADRLGLSQLYQLRGRVGRSNRMAYAFLLYRRDKMLKEVAEKRLAAIREFTDLGSGFKIAMRDLEIRGAGNLLGAEQHGHMEAVGYDLYCKMLNEAVKQLKGEMEEEETFTTTMDLNVDAFIPASYIPNEYQKLDVYKRIAAIENREEMEDMTEELIDRFGDIPKKVEKLLEVAALKAQAHQLYVTAVEQKGEVYTFTMYEKAKVHPERIPKLIEDFRGELTFKADGVQPCFIYEKKRRNLKEKQTDALESTKNVLNGLKRLIGEEKSGIIDPLSK*