ggKbase home page

L3_079_000M1_scaffold_7206_3

Organism: dasL3_079_000M1_metabat_metabat_47_fa_fa

near complete RP 47 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 13 / 38 MC: 2
Location: 3179..3658

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 159.0
  • Bit_score: 311
  • Evalue 5.70e-82
Ribosomal RNA large subunit methyltransferase H n=2 Tax=Dorea RepID=A6BE64_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 159.0
  • Bit_score: 311
  • Evalue 4.10e-82
conserved hypothetical protein TIGR00246 similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 159.0
  • Bit_score: 275
  • Evalue 7.00e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Dorea longicatena → Dorea → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 480
ATGAAGATAACATTAATCACAGTGGGAAAGATAAAAGAAAAATATTTAAAAGATGCAATCGCAGAATACAGCAAACGTCTAAGCCGCTACTGTAAGCTGGAGATCATCGAGGTGGCAGATGAAAAGACTCCGGATAATGCAAGTGAGACCGTAGAAGATGGTATCCGCGACAAAGAAGGAGAGCGGATTCTCAAATATGTCAAGGACGATGCCTACGTCGTTACACTTGAAATCAAGGGAAAACTTCTGACCTCAGAAGAACTGGCAGAAAAGATTGACAAGCTTGGGATCCAGGGAACCAGTCACATTATATTTATCATCGGCGGCTCGATCGGACTTGGAAAAGAAGTGCTGAAACGCTCGGATTATGCACTAAGTTTTTCAAAGATGACATTTCCACATCAGCTGATGCGGGTGATCCTCCTGGAACAGATCTACCGAAGCTACCGGATCATCAGCCATGAACCATATCATAAGTAA
PROTEIN sequence
Length: 160
MKITLITVGKIKEKYLKDAIAEYSKRLSRYCKLEIIEVADEKTPDNASETVEDGIRDKEGERILKYVKDDAYVVTLEIKGKLLTSEELAEKIDKLGIQGTSHIIFIIGGSIGLGKEVLKRSDYALSFSKMTFPHQLMRVILLEQIYRSYRIISHEPYHK*