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dasL3_079_234G1_concoct_17_fa

L3_079_234G1_public_Escherichia_coli_51_7
In projects: L3_079_234G1_public

Consensus taxonomy: Escherichia coli  →  Escherichia  →  Enterobacteriales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Displaying items 1-50 of 989 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L3_079_234G1_scaffold_392
Species: Escherichia coli (97.3%)
37 36846 bp 51.17 7.47 88.36
L3_079_234G1_scaffold_781
Species: Escherichia coli (95.83%)
24 18547 bp 50.43 6.96 86.84
L3_079_234G1_scaffold_550
Species: Escherichia coli (95.45%)
22 27692 bp 51.58 7.29 92.40
L3_079_234G1_scaffold_621
Species: Escherichia coli (100%)
21 24240 bp 49.86 7.20 86.50
L3_079_234G1_scaffold_1246
Species: Escherichia coli (71.43%)
21 9956 bp 50.05 7.77 92.69
L3_079_234G1_scaffold_743
Species: Escherichia coli (100%)
19 19513 bp 49.84 8.17 87.53
L3_079_234G1_scaffold_744
Species: Escherichia coli (94.74%)
19 19511 bp 51.75 6.90 89.33
L3_079_234G1_scaffold_868
Species: Escherichia coli (100%)
18 16323 bp 52.24 7.51 94.63
L3_079_234G1_scaffold_701
Species: Escherichia coli (94.44%)
18 20922 bp 54.12 7.81 91.76
L3_079_234G1_scaffold_818
Species: Escherichia coli (100%)
18 17582 bp 51.56 8.01 86.76
L3_079_234G1_scaffold_882
Species: Escherichia coli (94.12%)
17 16023 bp 53.34 6.23 94.20
L3_079_234G1_scaffold_901
Species: Escherichia coli (94.12%)
17 15535 bp 51.05 6.60 93.02
L3_079_234G1_scaffold_1148
Species: Escherichia coli (87.5%)
16 11205 bp 49.79 6.71 83.61
L3_079_234G1_scaffold_765
Species: Escherichia coli (100%)
16 18904 bp 50.08 7.37 90.00
L3_079_234G1_scaffold_852
Species: Escherichia coli (100%)
15 16723 bp 50.49 7.70 85.66
L3_079_234G1_scaffold_1016
Species: Escherichia coli (100%)
15 13469 bp 52.39 7.61 94.24
L3_079_234G1_scaffold_1037
Species: Escherichia coli (93.33%)
15 13108 bp 51.35 8.14 88.76
L3_079_234G1_scaffold_881
Species: Escherichia coli (93.33%)
15 16065 bp 52.25 7.93 88.74
L3_079_234G1_scaffold_1057
Species: Escherichia coli (86.67%)
15 12662 bp 51.41 7.96 92.21
L3_079_234G1_scaffold_780
Species: Escherichia coli (93.33%)
15 18558 bp 51.63 7.41 93.42
L3_079_234G1_scaffold_1713
Species: Escherichia coli (86.67%)
15 6810 bp 49.87 7.31 89.07
L3_079_234G1_scaffold_1062
Species: Escherichia coli (100%)
14 12585 bp 44.91 7.10 84.51
L3_079_234G1_scaffold_950
Species: Escherichia coli (92.86%)
14 14597 bp 52.30 6.97 91.83
L3_079_234G1_scaffold_952
Species: Escherichia coli (92.86%)
14 14558 bp 53.18 7.81 93.93
L3_079_234G1_scaffold_959
Species: Escherichia coli (92.86%)
14 14399 bp 49.62 7.19 86.74
L3_079_234G1_scaffold_1133
Species: Escherichia coli (100%)
14 11362 bp 49.61 8.67 91.44
L3_079_234G1_scaffold_1147
Species: Escherichia coli (92.86%)
14 11211 bp 52.62 6.06 88.89
L3_079_234G1_scaffold_822
Species: Escherichia coli (100%)
14 17536 bp 52.87 7.47 89.01
L3_079_234G1_scaffold_1247
Species: Escherichia coli (92.86%)
14 9950 bp 51.54 7.49 90.06
L3_079_234G1_scaffold_839
Species: Escherichia coli (100%)
13 17043 bp 51.01 8.72 85.18
L3_079_234G1_scaffold_1047
Species: Escherichia coli (100%)
13 12875 bp 45.61 7.28 78.73
L3_079_234G1_scaffold_905
Species: Escherichia coli (92.31%)
13 15467 bp 51.25 7.02 90.52
L3_079_234G1_scaffold_1081
Species: Escherichia coli (100%)
13 12189 bp 49.77 7.73 82.21
L3_079_234G1_scaffold_937
Species: Escherichia coli (84.62%)
13 14811 bp 51.95 6.58 90.70
L3_079_234G1_scaffold_1117
Species: Escherichia coli (100%)
13 11492 bp 56.72 7.44 97.11
L3_079_234G1_scaffold_1134
Species: Escherichia coli (100%)
13 11333 bp 45.27 7.86 90.53
L3_079_234G1_scaffold_1199
Species: Escherichia coli (92.31%)
13 10517 bp 48.76 6.77 86.75
L3_079_234G1_scaffold_1226
Species: Escherichia coli (76.92%)
13 10111 bp 53.09 7.11 91.98
L3_079_234G1_scaffold_1004
Species: Escherichia coli (100%)
12 13574 bp 44.03 8.08 87.34
L3_079_234G1_scaffold_1029
Species: Escherichia coli (66.67%)
12 13268 bp 53.11 7.52 91.46
L3_079_234G1_scaffold_1154
Species: Escherichia coli (100%)
12 11170 bp 53.93 7.56 92.07
L3_079_234G1_scaffold_1157
Species: Escherichia coli (91.67%)
12 11119 bp 49.53 8.15 85.72
L3_079_234G1_scaffold_1168
Species: Escherichia coli (100%)
12 10924 bp 41.24 6.07 69.86
L3_079_234G1_scaffold_1174
Species: Escherichia coli (83.33%)
12 10770 bp 52.01 8.26 85.77
L3_079_234G1_scaffold_1686
Species: Escherichia coli (83.33%)
12 6947 bp 52.63 7.10 90.43
L3_079_234G1_scaffold_1182
Species: Escherichia coli (91.67%)
12 10673 bp 51.38 7.31 90.00
L3_079_234G1_scaffold_1188
Species: Escherichia coli (100%)
12 10639 bp 50.89 8.32 85.30
L3_079_234G1_scaffold_1206
Species: Escherichia coli (91.67%)
12 10427 bp 52.90 7.88 93.05
L3_079_234G1_scaffold_1059
Species: Escherichia coli (100%)
11 12653 bp 48.54 8.57 84.88
L3_079_234G1_scaffold_1082
Species: Escherichia coli (90.91%)
11 12184 bp 50.18 6.92 83.62
Displaying items 1-50 of 989 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.