ggKbase home page

L3_079_363G1_scaffold_18815_1

Organism: L3_079_363G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 16
Location: 2..451

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 149.0
  • Bit_score: 311
  • Evalue 5.40e-82
Ribonuclease Z n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FC40_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 149.0
  • Bit_score: 311
  • Evalue 3.80e-82
ribonuclease Z similarity KEGG
DB: KEGG
  • Identity: 82.6
  • Coverage: 149.0
  • Bit_score: 265
  • Evalue 5.20e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] symbiosum → Lachnoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 450
TTTGACGTGGAGCGGGCCAGGCAGCAGCAGATCCCCCAGAAATACTGGAACAGACTCCAGAAGGGGGAGACGGTGCAGGACGGAGAGAGGACGCTGACTCCGGATATGGTTCTGGGCCCTGCGAGGAAGGGAATCCGTGTCACCTACTGTACCGACACAAGGCCGGTTCCGGTCATTGCCGAATATGCAAAAGAGGCGGATCTTTTTATCTGTGAGGGGATGTACGGCGAGGACGGAAAGGAGTCCAAAGCCAGAGAATATAAGCACATGACCATGTATGAGGCGGCCAGCCTGGCCAGGACGGCCAAGCCTGCACAGATGTGGCTGACTCACTACAGCCCGTCCCTTAACAGACCGGAAGAATATATGGACAAGGTCAGAGAGATATTCCCTGAGGCGAAGGCAGCAAAGGACGGCTGGACGGCGGAACTGGGATTTGAGGAAGATTAG
PROTEIN sequence
Length: 150
FDVERARQQQIPQKYWNRLQKGETVQDGERTLTPDMVLGPARKGIRVTYCTDTRPVPVIAEYAKEADLFICEGMYGEDGKESKAREYKHMTMYEAASLARTAKPAQMWLTHYSPSLNRPEEYMDKVREIFPEAKAAKDGWTAELGFEED*