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This organism can only be binned in the context of its binning project SCN18_14_9_16_R1_B. Please contact the project owner (rohansach@berkeley.edu) to become a member and gain access.

L3_082_090G1_scaffold_183_35

Organism: L3_082_090G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 15
Location: comp(43768..47571)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 1267.0
  • Bit_score: 2558
  • Evalue 0.0
DNA polymerase III subunit alpha (EC:2.7.7.7) similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 1275.0
  • Bit_score: 1993
  • Evalue 0.0
DNA polymerase III, alpha subunit n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAI0_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 1267.0
  • Bit_score: 2556
  • Evalue 0.0

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Taxonomy

Collinsella sp. 4_8_47FAA → Collinsella → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3804
ATGGCATTCGTCCATCTGCACAATCACACTGTTTTCTCCATGCTCGACGGCGCAACCCGTATCCAGGATATGGTCAATCGTGCCGTTGAACTTGGCATGCCCGCCGTGGCCATTACCGACCACGGCTACATGTATGGCGTGCCCGACCTGGCGCTGGCCTGCGACGCCGTCAATCACAACACGCCCGAGTACAAAACCTGGAGCCACGACAAGGCCTTCTTGGAAAAGGACCGCCGCGACGAGCTGGTGGAGCCCGATCCCGAGGAAAACCCGCGCGAGCATGCCCAGTACGTCAAAGACATGGCCATGTGGGACGAGAAGGGCAACATCGACGAGCTCAAACCGCCCCTGGTCATCAAGCCCATCTTTGGCTGCGAGGTCTACTTTACGCCGGACGAGACCCTTGCCCGCGACCACAAGCCCGAGCTCTACCACATGATCCTTCTGGCCAAGGATCAGGAGGGCTACGTCAACCTAATGCAGACGGTCTCCGAGGCCGCCGTGCAGGGCTTTTACTACAAGCCGCGCGTGACGCTCGACAACCTGCGCCGCCATGCCAAGGGCATGATCTGCACGAGCGCCTGTATCGCGGGCATCATCCCCAAATACATCGACCGCGGCGACATGGAAGGCGCCATCAAGTGGGCCGAGACCTTCCGTGATACCTTCGAGCCCGGTGACTTCTACATCGAGATCCAGGAACACGGCATCACCACCGACAACGGCCTGACTGACGAGCAGATGGACCGCACGCTCATCGACATCGCCAAGCAGGTGGGCGTCAAGGTCATCGCCACCAACGACTTCCACTACCTGCGCCGCGAGGATGCGCCCGTGCAGGACGTCATCATGTGCATTGGTATGAATGCCAAGGTCGACGACCCCAACCGCATGCGCATGACCGGCTCGGAGTTTTACATGAAGACCGAGGAGGAGATGCGGGCGATGTTCCCGTATTGCCCCGAGGCCTGCGACAACACGCTCGAGATTGCTGACAAGTGCTACGTTGAGCTGGACTGGGACTCCATCATATTGCCGCGATTCCCGTTGCTCGATCCCGGCGAGACGCACGAGAGCCAGTTCCGCCGCGAGTGCGAGAAAGGCCTGCGCCAGCACTACGGTGACGACTGGGCCACGCGCGAGATCGGCGGCGTCAACATCAAAGAGCGCTTTGAGTACGAATACAAGGTCATCTGCGACAAGGGCTTTGCCGCCTACTTTTTGATCGTCGCCGAGTACGTGCAATGGGCTAAGGACAACGGCATCGGCGTCGGCCCCGGCCGTGGTTCTGCCGCCGGCGCTATCGTCGCCTACGCCATGAACATCACCGCGTTCGACCCGCTCGAGAACGGCCTGATGTTCGAGAGGTTCCTGTCCCCGCAGCGTACCGAGATGCCCGATATCGATATGGACTTCGACGATGAGCGGCGCCTCGAGGTCGTGGAGCACGTTCGCCAGCTCTACGGTCCCGAGAAGGTCACCCACGTCATCACCTACTCGACCATCAAGGCCAAGCAGGCCATCAACGACGCCGCGCGCGTCCTGGACTACCCGGTCTACATGGGCCAGCGTCTGTCCAAGATGGTCTCGAGCGACCCCAAGGTCAAGCTCAAGCAGGTACTCGAAAAACAACCCGGCAAAGAGGATCTGTTTAACCCCGACTTTGCCGAGGCCTATAAAAAGGACGACGACGCCCGCCGCATCATCGACACGGCGCTCTCGATCGAGGGCCTTACCCGTGGCGAGGGCGTGCACGCGTGCGCCGTTCTGATTTGCCGCGACCCCGTCAACGAGCACGTGCCCACCAAGCTCGATACCAAGGGCGGCGTCGAGATTACCCAGTACGAGGGCCATACCGTTGCCGACATGGGCCTGCTCAAGATGGACTTCCTGGGCCTGCGTACGCTGACGGTTATCTCCAAGGCCAAGGCCAACATCAAAAAGAACTTCGGCATCGACATCAAAGAGGAAGAGATTCCCTTTGACGACCCCGAGATCTTTAAGCTCATGGGCTCCGGCCACACCGCCGGCGTCTTCCAGGTCGAGTCCGCCGGCATGACGGCCACGATCAAGAACATGAAGCCCACCGAGTACAAGCACGTCGTGGCATTGATTGCCCTGTACCGCCCGGGCCCTCTGGGCGCCGGCATGGTTTCGTCCTATATCAACCGTATGAACGGCAAAGAGCCGGCCGCCTCCTATGACGACCGTCTGGACGACATCCTGGGCGAAACCTACGGCACCATGGTCTACCAGGAGCAGGTTATGCTCATCTCCGTCGAGATGTGCGGCTTCTCCAAGGGCGAATCGGACTCGCGTATCCGTAAGCCCGTGGCTAAGAAAAAGATCAAGCTGCTCACCTCGACGGTGCTCCACTGGGAGGATGGCTCGGACGAGACCACCTACGACCACTGGATGAACGGCGCTATCAAGAACAACTACACGCGCGAGGTCGCCCAGAAGATTTGGGACGATGTTCTCGAGTTCGCATCTTACGCCTTTAACAAGTCGCACTCCGCCGGCTACGCCATCCTGGTTATGCAGACGGCATGGCTTAAGGCGCACTATCCGCACGAGTACATGGCGGCCGTTCTGACGTCCTACACGGGCAAGACCGACAAGATCGTTCACTACGTCTCGGCGTGCCGTCACGACGGCATCCCCGTGCTGTCGCCAGATGTTAACGAGTCCGGTACCGAGTTCACGGCTACCAAGGAAGGCGTGCGCTTTGGTTTGGCCGGCATTCGCGGCGTGGGCACCGGCGTAGCGCAGGCGATTATCGCCGAGCGCGAGGCGGGCGGCCCGTTTAAGACACTGCACGACTTTGTCGAGCGCGTGGACTCGAGCCAGGCCAACCGTCGCGTGATCGAATCGCTCATCAAGGCAGGTGCTTTCGACTCCACGGGGTATCCGCGTCGCCAGATGATGCACTTCGTGGACAAGAACAACCCCGAGAACATCATCGATGCCGCCGTGAAGCGCCAAAAGGATCGCGCGAGCGGCCAGACGTCGTTCTTCGATATGTTTGGCGACGTTGAGGGCTCGGGCTTTGAGGTGAGCGTGCCCGATCCGGATGGCCAGGAGTGGGACCGCCACCTTAAGTTGAGCCAGGAGAAGGAGGTTCTGGGCATCTATGTCTCGGACCACCCGCTGCGCCCGTTTGAGTATGCACTAGCCAAGGCACGCGACTTCTCGTTCTCGCAGATCGATACCGGCTACGAGGTGCAAAACCCCACGGGCGGTACCATCAACCAGGAGATTCCCGAGGGCAAGGCGCTGTGGTGGGCCGGCATGGTCTCGAGCGTGTCCAAGCGCGTGACCAAAAACGGCGACCCCATGGGTATTGTGCAGCTCGAGGACATGGAAGGCGAGGTCACGGTCGTGGTGTTCCCCAAGACCTACAAAGAGGCCGAGGGATACCTGTACGGCGAGGTCGATCCCGAGACCGGTGCGCAGCTGTCTGATGCGTTTGTTCGCATTAAGGGCAAGCTCGAGCGTTCGGACCGCGGCGACCAGATCATCGCGCAGGAGATCGTGCCGCTTGAGCTTAACGAGGAGAACAACAAGCCCAAGGTGTTTGAGGTCATGGTGCCCAACAGCCGCTTTAGCCAGGGCAATATGGCGCGTCTTGCCACGGTGCTTACCGCAAACCCGGGCGGCGACCGCGTGGAGATCTTTATCGAGCAGGTGGACGGGCGCGTACTGCGTGCCGAGGTGCCGGCCAAGGTCAACGCACGCTCGATTCCGCTGCTGGCAGAGGCAAAGGCGATTGTGGGTAACCAAGGCAGAGTGACGGTAATTTAA
PROTEIN sequence
Length: 1268
MAFVHLHNHTVFSMLDGATRIQDMVNRAVELGMPAVAITDHGYMYGVPDLALACDAVNHNTPEYKTWSHDKAFLEKDRRDELVEPDPEENPREHAQYVKDMAMWDEKGNIDELKPPLVIKPIFGCEVYFTPDETLARDHKPELYHMILLAKDQEGYVNLMQTVSEAAVQGFYYKPRVTLDNLRRHAKGMICTSACIAGIIPKYIDRGDMEGAIKWAETFRDTFEPGDFYIEIQEHGITTDNGLTDEQMDRTLIDIAKQVGVKVIATNDFHYLRREDAPVQDVIMCIGMNAKVDDPNRMRMTGSEFYMKTEEEMRAMFPYCPEACDNTLEIADKCYVELDWDSIILPRFPLLDPGETHESQFRRECEKGLRQHYGDDWATREIGGVNIKERFEYEYKVICDKGFAAYFLIVAEYVQWAKDNGIGVGPGRGSAAGAIVAYAMNITAFDPLENGLMFERFLSPQRTEMPDIDMDFDDERRLEVVEHVRQLYGPEKVTHVITYSTIKAKQAINDAARVLDYPVYMGQRLSKMVSSDPKVKLKQVLEKQPGKEDLFNPDFAEAYKKDDDARRIIDTALSIEGLTRGEGVHACAVLICRDPVNEHVPTKLDTKGGVEITQYEGHTVADMGLLKMDFLGLRTLTVISKAKANIKKNFGIDIKEEEIPFDDPEIFKLMGSGHTAGVFQVESAGMTATIKNMKPTEYKHVVALIALYRPGPLGAGMVSSYINRMNGKEPAASYDDRLDDILGETYGTMVYQEQVMLISVEMCGFSKGESDSRIRKPVAKKKIKLLTSTVLHWEDGSDETTYDHWMNGAIKNNYTREVAQKIWDDVLEFASYAFNKSHSAGYAILVMQTAWLKAHYPHEYMAAVLTSYTGKTDKIVHYVSACRHDGIPVLSPDVNESGTEFTATKEGVRFGLAGIRGVGTGVAQAIIAEREAGGPFKTLHDFVERVDSSQANRRVIESLIKAGAFDSTGYPRRQMMHFVDKNNPENIIDAAVKRQKDRASGQTSFFDMFGDVEGSGFEVSVPDPDGQEWDRHLKLSQEKEVLGIYVSDHPLRPFEYALAKARDFSFSQIDTGYEVQNPTGGTINQEIPEGKALWWAGMVSSVSKRVTKNGDPMGIVQLEDMEGEVTVVVFPKTYKEAEGYLYGEVDPETGAQLSDAFVRIKGKLERSDRGDQIIAQEIVPLELNEENNKPKVFEVMVPNSRFSQGNMARLATVLTANPGGDRVEIFIEQVDGRVLRAEVPAKVNARSIPLLAEAKAIVGNQGRVTVI*