ggKbase home page

L3_082_090G1_scaffold_4_30

Organism: L3_082_090G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 15
Location: 28634..29221

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=2 Tax=Bifidobacterium adolescentis RepID=RIMM_BIFAA similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 195.0
  • Bit_score: 391
  • Evalue 3.80e-106
putative 16S rRNA-processing protein rimM similarity KEGG
DB: KEGG
  • Identity: 99.5
  • Coverage: 195.0
  • Bit_score: 391
  • Evalue 1.10e-106
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 195.0
  • Bit_score: 391
  • Evalue 4.10e-106

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium ruminantium → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGCATTCCGACGACCCTCAACAGCTTGAGCTGCTGAGGGTCTGTCGTATCGGGCGTGCGCAGGGGCTCAAGGGCGAGGTCACCGTGCAGATCTTTACGGACGAACCGGAATACCGGTTCGCTCCCGGTGCTGTGTTGTATACGAAGGACGGCGAGGAAGAGTACGTGGTGGAAAGCTCCCGTACCTTCAAAAACCGTTGGATCATCAAATTCGAAGGCATCGACGACCGTGATGCGTCCGAAGCCGCCAATGGCGTGGTGCTGTATGGCGAAGCGGACGATCCGGAGGAGATGCTTGAGGCGGACGAGTGGTATCCGAAGGACCTGATCGGGCTTGAGGCGCGCCTTGCCGAGGGCAATACGCTGGGGCTTGCGCCCGGCACTGTGGTAGGCAAGGTGGTGGATGTGATCGAAGTGGCCCAGTGGCTGCTCAAGATCCGTCTGGCCAATCCCGTCAAGGACGCCGATGGCGTGGTGGTCGAGAACAGCGCGCTCGTGCCGTTCGTGGACGAGCTCGTGCCGGACATCGACCTCGAGGGCGGATATCTGACCCTCGACCCGCCGGGCGGACTCATTCCGGGGCTCTGA
PROTEIN sequence
Length: 196
MHSDDPQQLELLRVCRIGRAQGLKGEVTVQIFTDEPEYRFAPGAVLYTKDGEEEYVVESSRTFKNRWIIKFEGIDDRDASEAANGVVLYGEADDPEEMLEADEWYPKDLIGLEARLAEGNTLGLAPGTVVGKVVDVIEVAQWLLKIRLANPVKDADGVVVENSALVPFVDELVPDIDLEGGYLTLDPPGGLIPGL*