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L3_082_090G1_scaffold_310_35

Organism: L3_082_090G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 15
Location: 41844..45476

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 1210.0
  • Bit_score: 2341
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9V3_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 1210.0
  • Bit_score: 2341
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 72.1
  • Coverage: 1210.0
  • Bit_score: 1714
  • Evalue 0.0

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Taxonomy

Collinsella aerofaciens → Collinsella → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3633
ATGCTCATTCACCGTATAGCCGCGCAGCTCTACACTGCCGAGGCGCTGCAGACCGTCGAGGCCGGACTCGATGCCGGCGAGGACGTGACGCTGGCCGTGTCGCAGTCGGGTCGCACGCTTATGGCGGCCGCCCAGTTTGCGCGCCGTCCGCGCCCGACGGTCTACATTGTGAGCGGCGAGGATGCGGCCGATCGCGCCGCGCGCAGCCTTGCCGCCTACGTGGGTCTGGCACACGTGTGCCGTTTTCCCGAGCGCAAGGACTATCCGTGGCGCGAGCAGGCGCCCGACGATGCTGTGGTTGCCCAGCGCTGCGAGGCCCTGGGACGCATCGTTCGCGGTGACAACTGCATCATGGTCGCCTCGGCCCGCGCGTTGCTGCGTTGCGTGCCGCCAGTCGAGAGCCGCTACTGGGAGTCCACGACCTTCGCGGTGGGCGAGGAGATTCCTTTTGACGAGGTGCCGCAGCGCCTGGTGGGCATGGGCTACACCAATGCCGGCGCCGCCGACGCGCCTGGTCTGTTCCGCGTGCACGGCGACACCGTCGAGGTGTTCCCCGCGCAGGAAAAAGCGCCCGTGCGCATTGAGTTCTTTGGCGACGAGATCGACCGCATCCGCCGCATGGTGAGTTCAACGGGCCAGACCATCGGCAACGAGGACAGCATCGAGATCTTCCCCTGTCGCGAGCTGGCGCTTACCGACGAGGCCGTTCACAACATGCATGTGGCGCTCTACCGCGCCAGCCAGGACGACAGCAAGTTGGCGGCGCTGCTCGAGATGGTGGATGCGCGCATCGTCACGCCTGAGCTCGACCGCTTTTTGCCGGTGATGTACGGCCAGACCGTGAGCCCGCTTTCGCATGTGAGCGGCAAGGCGCTCGTAGTGCTGTCCGAGCCGCGCTCGCTGTTCGACGATTGCCTGCGCGCCTACGAGGATATCGAGGCACGTGCCGGCGAGGCGGGGGTCGACCGTCTGGACGGCCTGTATGTGCGTGCCCAGCAGCTCGATTTTGGTGCTCAGCAGCGCCTGAACTATGTGAGCCTCATCCGTGCCGGCGGTGCGGTGACGGCAGAGCTCAAGATTGAGCAGCCGGCCATTGCGGGCTCGGACAATCGCTTTATGACGCGCATCCAGGAGGTCGTGGGCAAGCGCTATGCCTGCGTGTTTGCCATCCCCGACCGCGGTGCGCGCGAGTCGATGGAGCTCACCTTTGGCGACGAGGGCATTACCTTTGAGGAATCGCTGACCGCCGCGCCCGAAAATGCCGGCGCTATCGGCGACCGCGTGCGCGTGGCAGCGGCGGGTTCCGCCGACCGTGCCGCACGCCAGGAGGCCCATGCTTCCATTCGCGAGCGTAAGGCCGATGCGCTCAACGCCCGCTCGCTCGAGGCGGGTGCCGCCCAGGCTGCCGCCGGTGCCGCCGTGCCCACCATCTCGCGCGGACGCGTGACCTTTGTCGATGCTGCCTTGCCGCAGGGCGTGGTGGTGCCCGATGCCAACCTGGCCGTATTCTCGATTGCCGACCTCAACGCCCGCATGGATGCCAACCGCGCGCGCAGCCGCCGCAAGGTTGACATTACGCAGATCACCTTCCCCTTTAAGCCGGGCGACTACGTGGTGCACGCTACCCACGGTATCGCGCTCTTTAGCGAGATCGCGCGCCAGGAAGTGGGCGGCAAGGAACGCGACTACTTTTTGCTGGAATACGCCGACGGCGACAAACTCTACGTGCCGCTGGAGCAGGTTGACCGCATTACGCGCTACGTTGGTCCCGACGGCGATAAACCGCGCTTGACCAGGCTCAACACCGCCGACTGGACGCGGGCCACCAACAAGGCGCGCAAGAATGCCAAAAAGCTGGCGTTTGACCTGGTCGACCTCTATACGCGTCGCTCGTCGATTACCGGTATCGCCTGTCCGCCCGATACGCCCGAGCAGATCGAGATGGAGGAGAGCTTCCCCTACGACGAGACGCGCGACCAGCTGGAGGCCATCGCCGACATCAAGGCCGACATGGAGGCGCCCAAGCCCATGGACCGCCTGCTGTGCGGCGACGTGGGTTTCGGCAAGACCGAGGTCGCCCTGCGCGCGGCCTTTAAGTGCGTGGACTCCGGCCGTCAGGTCATGGTGCTCTGCCCCACGACCATTCTGGCCCAACAGCACTACGAGACATTCTTTGAGCGCTTTGCCCCGTTTGGCCTGGAGGTCGAGGTGCTCAGCCGTTTCCGCACCCCGGCGCAGCAAAAGCGCGCGCTCAAGGCGTTTGCCGAGGGCACGATTGATGTGCTCATCGGCACGCACCGCTTGCTTTCTGCCGATGTGAACCCCAAGAACCTGGGCATGGTGATCATCGACGAAGAGCAGCGCTTTGGTGTGCAGCACAAGGAGCAGCTCAAAAACCTGCGCGAGCAAATCGACGTGCTCACGCTCTCGGCAACGCCTATTCCGCGAACCATGCAGATGGCCACGAGCGGCGTGCGCGACATGAGCCTGATCACCACGCCGCCGACCGGGCGTCGTCCCGTGATCGTGCACGTGGGGGAGTACGACCCCGACGTGGTGAGTGCGGCGATTCGCCTGGAGGTGGGCCGCGGCGGTCAGGTGTATTACGTGTCCAACCGCGTCAAGACCATCGACGACGCCGTGGCGCGCGTGCACGAGGCCGCGCCCGAGGCGCGCGTGGGCGTGGCACACGGCAAGATGAGCCCGCGCGAGGTCGAGGACGCGATGATCGAGTTCGCGACCAAGAAGATTGACGTGCTTATCGCCACGACCATCGTTGAGAGCGGTATCGACAACGCGACCGCCAACACGCTCATCATCGAGGACTCGCAGCGTCTGGGCCTGGCACAGCTCTACCAGCTTAAGGGCCGCGTGGGCCGCTCGGCCACGCAGGCATACGCGTACTTTATGTTCCCCGGCGAGCTGCCGCTTACCGAGGAGGCCACGGCACGCCTGACTGCACTTTCAGAGTTCCAGGACCTGGGCAGCGGCATGCGCATCGCCATGCGCGACCTGGAGATTCGCGGCGCCGGCTCGCTTATGGGCGCCGAGCAGCATGGCAACTTGTCGAGCGTGGGCTTTGACCTGTTTACGCAGATGCTGGGCCAAGCCGTGGCCGAGGCGCGCGGCGATGACGATGCCGGCGTGGAGGCGGCGAGCGTGGGCATCAACCTGCCGGCCGACTACTTCTTGTCCGAGGAGTACCTACCGGCGGTGGATCAGCGCGTGCTCGTGTACCGTAAGCTCGCAGCGGCCGAGGACCTTGAGAGCATCGATGAGGTGCAGGAGGAGACCGAGGCTGCGCATGGCGAGCTGCCGTTGGCGGGACTCAACCTGTTCAACCGCGCTCGCATTCGTATTCGCGGCGAGCGCCTGGGGCTCGAGAGCGTCACGCTCAGCGGTGGACGCATTACCTTCCTGGGGGTTGACGTGCCCAAGAAGGTGGCCTTTGAGCTTAAGACCCGCTATGGCGCGGTGAACTTTCCCAAGAGCCGCAAGCTGTCGGTGCCCTACAAGGCGGGCGCCGGCGCGGGCAGCGGCCTGGGTCGCGGCCTCGACGCCAACGACGGCACCGGCCCCGTGGCCGCGGCGCTCATGCTGCTGCAGCAGCTGGGTGCGAGCGACGATGACTAA
PROTEIN sequence
Length: 1211
MLIHRIAAQLYTAEALQTVEAGLDAGEDVTLAVSQSGRTLMAAAQFARRPRPTVYIVSGEDAADRAARSLAAYVGLAHVCRFPERKDYPWREQAPDDAVVAQRCEALGRIVRGDNCIMVASARALLRCVPPVESRYWESTTFAVGEEIPFDEVPQRLVGMGYTNAGAADAPGLFRVHGDTVEVFPAQEKAPVRIEFFGDEIDRIRRMVSSTGQTIGNEDSIEIFPCRELALTDEAVHNMHVALYRASQDDSKLAALLEMVDARIVTPELDRFLPVMYGQTVSPLSHVSGKALVVLSEPRSLFDDCLRAYEDIEARAGEAGVDRLDGLYVRAQQLDFGAQQRLNYVSLIRAGGAVTAELKIEQPAIAGSDNRFMTRIQEVVGKRYACVFAIPDRGARESMELTFGDEGITFEESLTAAPENAGAIGDRVRVAAAGSADRAARQEAHASIRERKADALNARSLEAGAAQAAAGAAVPTISRGRVTFVDAALPQGVVVPDANLAVFSIADLNARMDANRARSRRKVDITQITFPFKPGDYVVHATHGIALFSEIARQEVGGKERDYFLLEYADGDKLYVPLEQVDRITRYVGPDGDKPRLTRLNTADWTRATNKARKNAKKLAFDLVDLYTRRSSITGIACPPDTPEQIEMEESFPYDETRDQLEAIADIKADMEAPKPMDRLLCGDVGFGKTEVALRAAFKCVDSGRQVMVLCPTTILAQQHYETFFERFAPFGLEVEVLSRFRTPAQQKRALKAFAEGTIDVLIGTHRLLSADVNPKNLGMVIIDEEQRFGVQHKEQLKNLREQIDVLTLSATPIPRTMQMATSGVRDMSLITTPPTGRRPVIVHVGEYDPDVVSAAIRLEVGRGGQVYYVSNRVKTIDDAVARVHEAAPEARVGVAHGKMSPREVEDAMIEFATKKIDVLIATTIVESGIDNATANTLIIEDSQRLGLAQLYQLKGRVGRSATQAYAYFMFPGELPLTEEATARLTALSEFQDLGSGMRIAMRDLEIRGAGSLMGAEQHGNLSSVGFDLFTQMLGQAVAEARGDDDAGVEAASVGINLPADYFLSEEYLPAVDQRVLVYRKLAAAEDLESIDEVQEETEAAHGELPLAGLNLFNRARIRIRGERLGLESVTLSGGRITFLGVDVPKKVAFELKTRYGAVNFPKSRKLSVPYKAGAGAGSGLGRGLDANDGTGPVAAALMLLQQLGASDDD*