ggKbase home page

L3_082_090G1_scaffold_835_3

Organism: L3_082_090G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 15
Location: comp(2181..2729)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=13 Tax=Bacteroides RepID=E1WW83_BACF6 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 182.0
  • Bit_score: 362
  • Evalue 1.40e-97
putative RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 182.0
  • Bit_score: 362
  • Evalue 3.80e-98
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1339314 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3976T8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 182.0
  • Bit_score: 362
  • Evalue 1.90e-97

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bacteroides fragilis → Bacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 549
ATGAGCCAGCTCAATGATATATCGTTAGTCGCACAGGTCGTGGTGTTCAGAAACACCAGGGCCTTCGACCAATTGGTACAGAAATATCAGTCGCCTGTACGGCGCTTCTTTCTGAACCTGACCTGCGGCGACAGCGAACTGAGCGACGACTTGGCACAAGATACGTTTATAAAAGCCTACACAAACATTGCAAACTTTAAAAATCTCTCAAGTTTCTCAACATGGCTTTACAGAATTGCTTATAACGTATTTTATGATTATATTCGCAGCCGAAAGGAAACAACAGACCTGGATGCCCGCGAAGTAGACGCTGCCAATAGTACCGAACAAGTAAACGTGGGTGAACAGATGGATGTTTACCAATCACTCAGAACGCTGAAAGAAATAGAACGCACCTGCATCACTCTGTTCTATATGGAAGACGTAAGTATAGACAAGATTGCGGGAATAACGGGGTGCCCGGTAGGAACGGTCAAATCGCACCTTTCAAGGGCTAAAGATAAATTAGCTATTTACTTAAAACAAAACGGTTATGACGGAAACAGATGA
PROTEIN sequence
Length: 183
MSQLNDISLVAQVVVFRNTRAFDQLVQKYQSPVRRFFLNLTCGDSELSDDLAQDTFIKAYTNIANFKNLSSFSTWLYRIAYNVFYDYIRSRKETTDLDAREVDAANSTEQVNVGEQMDVYQSLRTLKEIERTCITLFYMEDVSIDKIAGITGCPVGTVKSHLSRAKDKLAIYLKQNGYDGNR*