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L3_082_090G1_scaffold_6208_2

Organism: L3_082_090G1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 15
Location: 153..1211

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.0
  • Coverage: 352.0
  • Bit_score: 668
  • Evalue 3.10e-189
putative tRNA-pseudouridine synthase I (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 330.0
  • Bit_score: 246
  • Evalue 5.90e-63
UPI0003D6421E related cluster n=1 Tax=unknown RepID=UPI0003D6421E similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 352.0
  • Bit_score: 668
  • Evalue 2.20e-189

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Taxonomy

Varibaculum cambriense → Varibaculum → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1059
GTGCTAGACGCGCTTAATCAGGCTCCAGATTTTGCTCCCGCCGGCGCAGATCTGCAAGTTCCTCGTGCCGATAATACTGCCCCTGCTGGGGTAATTGCGGTTGATAAACCCCTGGGGGTTACCAGTCATGATGTAGTGGCGCGCCTGCGCCGCTTGGCGGGAACTCGCAAGGTGGGACATGCCGGAACCCTAGATCCGGCGGCCTCGGGAGTATTAGTGGCCGGTATTGGGCGGGGAACCAAACTCTTGCAATACCTGCAGGCGCAAAGGAAAACTTATGTCACCCGGGTGTGCTTCGGGGTAGAAACCGATAGCGAGGACGCCGAAGGTACCATTACCGCGACCCGGGGAGCTACTCTAGCGGATCTGGATAGTTTAGACACTGCGATTTCCTCTTGGCGCGGACAGGTAATGCAGGTGCCGAGCGCTTTTTCTGCTCTGAAGATCCAGGGGAAACGAGCAGCGGATCGGGTACGCGCCGGGGAAGAAGTCCGGATGGAGCCCCGCCCGATTACTATCTATGAACTACTTAGCCTGGGCGAGCCGAAAGCGGGTGAACTGGCAGGTACACCGGTGGTTTACCAGGACTTGGAAGTTACCTGTTCGGCAGGTACCTATGTTCGCGCCCTCGGAAGGGATCTGGGAAACCAATTGGGGGTAGGGGCGCATCTGGTGGCGCTGCGGCGTCTTAAGGTTGGTTCCTTTAGCGTTAACGGCGTCGCCCGTTCCGATGCGCCTTTTAACGCCTATAGCCTGGCTGAGTTATCTGGGTTGGTAACGGCAGGCGGGGAACTGCCGGTAGTGAGCCTGGATCAGATCTGCCAGCATCTGTTCCCCAGCTGTCAGGTAACCCCCGAAGTTATCACCGCTTTAGGTTATGGCCAGCGCCCGAGAATTGACTCTCAGCTTGCGCACGATCTTGGTATTAATCTCGAGAACACGTCTTCACCAGGAAACATATATGCTTTAACGGATTCTTCGGGTAGTCCAATCTTTTTGGCGCAACAAGCCGGATCTTTTTGGCGCACTGTACTCAACCTGCATCCATCGGTTGATTAG
PROTEIN sequence
Length: 353
VLDALNQAPDFAPAGADLQVPRADNTAPAGVIAVDKPLGVTSHDVVARLRRLAGTRKVGHAGTLDPAASGVLVAGIGRGTKLLQYLQAQRKTYVTRVCFGVETDSEDAEGTITATRGATLADLDSLDTAISSWRGQVMQVPSAFSALKIQGKRAADRVRAGEEVRMEPRPITIYELLSLGEPKAGELAGTPVVYQDLEVTCSAGTYVRALGRDLGNQLGVGAHLVALRRLKVGSFSVNGVARSDAPFNAYSLAELSGLVTAGGELPVVSLDQICQHLFPSCQVTPEVITALGYGQRPRIDSQLAHDLGINLENTSSPGNIYALTDSSGSPIFLAQQAGSFWRTVLNLHPSVD*