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dasL3_083_059G1_concoct_39_fa

L3_083_059G1_public_Veillonella_39_6
In projects: L3_083_059G1_public

Consensus taxonomy: Veillonella  →  Selenomonadales  →  Negativicutes  →  Firmicutes  →  Bacteria

Metagenomic Context

Parent: L3_083_059G1_public_UNK

Properties

Avg. coverage: 5.50 Longest contig: 9.31 Kbp Bin length: 1.49 Mbp GC content: 39.44 %
Contigs count: 617 Features count: 1879 rRNAs count: 0 tRNAs count: 0

Genome completeness

near complete RP 42 / 55 BSCG 43 / 51 MC: 5 ASCG 14 / 38 MC: 2
Displaying items 351-400 of 617 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L3_083_059G1_scaffold_10068
Species: Veillonella sp. HPA0037 (50%)
2 1030 bp 38.83 4.66 90.00
L3_083_059G1_scaffold_7109
Species: Veillonella sp. ACP1 (50%)
2 1482 bp 40.08 6.07 95.95
L3_083_059G1_scaffold_8997
Species: Veillonella sp. HPA0037 (50%)
2 1150 bp 37.04 4.70 90.00
L3_083_059G1_scaffold_9088
Species: Veillonella atypica (50%)
2 1138 bp 41.56 5.54 100.18
L3_083_059G1_scaffold_8489
Species: Veillonella atypica (100%)
2 1224 bp 38.64 5.02 93.38
L3_083_059G1_scaffold_6835
Species: Veillonella atypica (50%)
2 1547 bp 34.32 5.04 89.79
L3_083_059G1_scaffold_6836
Species: Veillonella sp. ACP1 (50%)
2 1546 bp 43.73 5.34 84.22
L3_083_059G1_scaffold_7884
Species: Veillonella sp. DORA_A_3_16_22 (50%)
2 1329 bp 38.60 4.63 98.65
L3_083_059G1_scaffold_4908
Species: Veillonella atypica (100%)
2 2195 bp 38.36 5.33 91.16
L3_083_059G1_scaffold_3517
Species: Veillonella atypica (50%)
2 3277 bp 43.09 4.49 97.77
L3_083_059G1_scaffold_5704
Species: Veillonella sp. ICM51a (50%)
2 1864 bp 41.52 5.15 93.99
L3_083_059G1_scaffold_3776
Species: Veillonella atypica (50%)
2 2978 bp 43.75 6.45 94.39
L3_083_059G1_scaffold_7377
Species: Veillonella atypica (100%)
2 1422 bp 38.19 5.27 91.35
L3_083_059G1_scaffold_8241
Species: Veillonella sp. ACP1 (100%)
2 1266 bp 35.86 4.74 83.89
L3_083_059G1_scaffold_10081
Species: Veillonella atypica (50%)
2 1028 bp 39.40 4.38 89.88
L3_083_059G1_scaffold_7122
Species: Veillonella sp. ICM51a (100%)
2 1478 bp 41.14 5.28 100.27
L3_083_059G1_scaffold_4658
Species: Veillonella sp. oral taxon 158 (50%)
2 2340 bp 40.60 6.60 92.82
L3_083_059G1_scaffold_5964
Species: Veillonella atypica (50%)
2 1778 bp 37.29 4.98 88.41
L3_083_059G1_scaffold_7637
Species: Veillonella atypica (100%)
2 1368 bp 40.57 4.28 93.64
L3_083_059G1_scaffold_7638
Species: Veillonella sp. ICM51a (50%)
2 1368 bp 41.08 4.06 89.25
L3_083_059G1_scaffold_10086
Species: Veillonella atypica (50%)
2 1028 bp 39.40 4.23 98.05
L3_083_059G1_scaffold_7639
Species: Veillonella atypica (50%)
2 1368 bp 37.65 5.04 99.34
L3_083_059G1_scaffold_6080
Species: Veillonella atypica (50%)
2 1745 bp 38.62 3.87 92.84
L3_083_059G1_scaffold_7385
Species: Veillonella sp. HPA0037 (50%)
2 1420 bp 43.17 4.65 92.54
L3_083_059G1_scaffold_6596
Species: Veillonella sp. ICM51a (50%)
2 1599 bp 43.46 5.63 77.86
L3_083_059G1_scaffold_8764
Species: Veillonella dispar (50%)
2 1184 bp 43.33 4.69 95.52
L3_083_059G1_scaffold_7901
Species: Veillonella atypica (50%)
2 1325 bp 40.53 4.98 80.38
L3_083_059G1_scaffold_8765
Species: Veillonella atypica (50%)
2 1184 bp 35.56 4.56 56.76
L3_083_059G1_scaffold_8511
Species: Veillonella atypica (50%)
2 1221 bp 38.00 6.02 93.61
L3_083_059G1_scaffold_5466
Species: Veillonella atypica (50%)
2 1950 bp 34.05 5.62 89.23
L3_083_059G1_scaffold_8002
Species: Veillonella atypica (50%)
2 1308 bp 39.45 5.73 98.85
L3_083_059G1_scaffold_6091
Species: Veillonella sp. ICM51a (50%)
2 1741 bp 36.76 4.39 73.58
L3_083_059G1_scaffold_7908
Species: Veillonella atypica (50%)
2 1324 bp 38.37 7.48 98.79
L3_083_059G1_scaffold_9631
Species: Veillonella atypica (100%)
2 1077 bp 43.08 6.27 99.44
L3_083_059G1_scaffold_5983
Species: Veillonella sp. ICM51a (50%)
2 1773 bp 43.60 4.40 99.15
L3_083_059G1_scaffold_7656
Species: Veillonella atypica (50%)
2 1365 bp 43.37 5.27 94.29
L3_083_059G1_scaffold_6865
Species: Veillonella sp. ACP1 (50%)
2 1540 bp 43.57 5.26 88.44
L3_083_059G1_scaffold_10105
Species: Veillonella atypica (50%)
2 1025 bp 35.22 4.83 71.12
L3_083_059G1_scaffold_4942
Species: Veillonella sp. ACP1 (50%)
2 2182 bp 34.92 14.44 94.18
L3_083_059G1_scaffold_5990
Species: Veillonella sp. ICM51a (50%)
2 1772 bp 39.67 4.40 94.30
L3_083_059G1_scaffold_9127
Species: Veillonella sp. ACP1 (50%)
2 1133 bp 36.36 5.69 101.68
L3_083_059G1_scaffold_4945
Species: Veillonella atypica (100%)
2 2179 bp 38.87 4.47 83.57
L3_083_059G1_scaffold_6874
Species: Veillonella sp. HPA0037 (50%)
2 1538 bp 40.77 6.24 97.33
L3_083_059G1_scaffold_4690
Species: Veillonella sp. ICM51a (50%)
2 2319 bp 43.51 6.53 82.79
L3_083_059G1_scaffold_8788
Species: Veillonella sp. HPA0037 (100%)
2 1180 bp 35.34 3.18 96.86
L3_083_059G1_scaffold_8022
Species: Veillonella sp. ICM51a (50%)
2 1305 bp 39.39 4.83 83.45
L3_083_059G1_scaffold_8278
Species: Veillonella sp. HPA0037 (50%)
2 1260 bp 40.63 3.10 99.29
L3_083_059G1_scaffold_7672
Species: Veillonella atypica (100%)
2 1362 bp 40.38 3.74 89.21
L3_083_059G1_scaffold_7417
Species: Veillonella sp. ICM51a (100%)
2 1414 bp 40.52 5.62 96.32
L3_083_059G1_scaffold_8026
Species: Veillonella sp. HPA0037 (50%)
2 1304 bp 37.04 3.80 96.40
Displaying items 351-400 of 617 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.