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L3_098_000G1_scaffold_5674_4

Organism: dasL3_098_000G1_concoct_85_sub_fa

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(2374..3270)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1190620 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM42b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 298.0
  • Bit_score: 595
  • Evalue 2.20e-167
tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 90.3
  • Coverage: 298.0
  • Bit_score: 540
  • Evalue 2.90e-151
tRNA pseudouridine synthase A n=1 Tax=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) RepID=C8W7W7_ATOPD similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 298.0
  • Bit_score: 540
  • Evalue 1.00e-150

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Taxonomy

Atopobium sp. ICM42b → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGAACTCAGAAACATCACAAAACATTGCATCAAATTGCAGTTTTGATGCATGCGAGGAGTCTTCGGCTGAGCCTTCAGCTCCTGAGACTCTCGCTGAAGCCCCTTCTGAGCCTGAAGCTACGCTTGTTATCCAGCTGGGCTACCGCGGCGCTGCATTCTGCGGCTTTGCCGAGCAGCCCACCCAGCGCACCGTTGCAGGAGACCTTCGCCGCGCGCTTCAGACCGTTTTGCGCAGAGAGGTCGAGCTCACCTGCGCGGGCAGAACCGACGCCGGCGTGCACGCCCAGGCTCAGTACGTGAGCCTTCCCGTATATGGCGCTGAACTGGCGCTGTCTGGCGAGAAACTCGTCCGCTCGCTTACCGCTCTGACCGACGACGACATCTCTATCCGACAACTCTTCCGTGCCCCACAGGGTTTCTCGGCACGCTTTGATGCCCAGGCTCGCTCGTACCGCTATCGCATTTGTGCAGATAGCGCTCGTCCCGTGCTGGGCTGGGACCACGTGTGGTGGTACAACGGTCACTTGGACGCAGAGCTTATGGACAAGGCGGCGCAGGCGCTGGTGGGAGAGCACGATTTCAAGAGCTTCTGCAAGGCAATTTCTGCCGAGGGCAAGCCAACGCATCGTTTTGTGGAGCGCCTTACGGTAGAAGAAATTGAAGAGGCTGGCGAGAAACTCATTGCAGTTGATATTACGGGCAACGCCTTCTTGCATAACATGGTGCGAACGATTGTGGGTACGCTGGTTGAGATTGGCCGCGGTCACAGGCCTGTTGAGTGGATTGACGAGGTTCTAGCTGCTCAGAACAGAATTGCTGCTGGCAGTTGCGCGCCTGCTCAGGGACTCACGTTTGCAAACGTTCGCTATCCAGAGGGTGTTTTGCAACCCTGGTAG
PROTEIN sequence
Length: 299
MNSETSQNIASNCSFDACEESSAEPSAPETLAEAPSEPEATLVIQLGYRGAAFCGFAEQPTQRTVAGDLRRALQTVLRREVELTCAGRTDAGVHAQAQYVSLPVYGAELALSGEKLVRSLTALTDDDISIRQLFRAPQGFSARFDAQARSYRYRICADSARPVLGWDHVWWYNGHLDAELMDKAAQALVGEHDFKSFCKAISAEGKPTHRFVERLTVEEIEEAGEKLIAVDITGNAFLHNMVRTIVGTLVEIGRGHRPVEWIDEVLAAQNRIAAGSCAPAQGLTFANVRYPEGVLQPW*