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L3_098_000M1_public_UNK

In projects: L3_098_000M1_public

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 90.42 Longest contig: 314.05 Kbp Bin length: 99.59 Mbp GC content: 45.63 %
Contigs count: 19418 Features count: 106672 rRNAs count: 11 tRNAs count: 1400

Genome completeness

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Displaying items 551-600 of 19418 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L3_098_000M1_scaffold_11691
Species: Blautia sp. CAG:257 (100%)
3 1552 bp 48.78 4.06 100.32
L3_098_000M1_scaffold_15082 3 1247 bp 32.24 4.57 100.32
L3_098_000M1_scaffold_15094
Species: Blautia sp. CAG:257 (100%)
2 1247 bp 45.79 6.86 100.32
L3_098_000M1_scaffold_11536
Species: Roseburia sp. CAG:18 (100%)
2 1567 bp 46.08 3.64 100.32
L3_098_000M1_scaffold_9259
Species: Subdoligranulum sp. 4_3_54A2FAA (100%)
3 1896 bp 59.34 2.29 100.32
L3_098_000M1_scaffold_7742
Species: Phascolarctobacterium sp. CAG:207 (100%)
4 2231 bp 44.29 5.92 100.31
L3_098_000M1_scaffold_9112
Species: Firmicutes bacterium ASF500 (100%)
4 1923 bp 62.56 4.91 100.31
L3_098_000M1_scaffold_3608
Species: Collinsella stercoris (66.67%)
6 4492 bp 62.60 6.38 100.31
L3_098_000M1_scaffold_7610
Species: Eubacterium hallii CAG:12 (75%)
4 2264 bp 40.99 4.44 100.31
L3_098_000M1_scaffold_11135
Species: Coprobacillus sp. 8_2_54BFAA (50%)
2 1618 bp 32.82 2.60 100.31
L3_098_000M1_scaffold_7847
Species: Bacteroides ovatus (50%)
4 3646 bp 50.80 104.00 100.30
L3_098_000M1_scaffold_10778
Species: [Clostridium] citroniae (100%)
2 1663 bp 32.41 5.05 100.30
L3_098_000M1_scaffold_13980
Species: Erysipelotrichaceae bacterium 5_2_54FAA (50%)
2 1331 bp 35.39 4.51 100.30
L3_098_000M1_scaffold_19419
Species: Clostridium hathewayi CAG:224 (50%)
2 1008 bp 47.52 2.08 100.30
L3_098_000M1_scaffold_10607
Species: Roseburia sp. CAG:18 (50%)
2 1687 bp 46.65 4.71 100.30
L3_098_000M1_scaffold_19281
Species: Roseburia sp. CAG:18 (100%)
2 1014 bp 43.89 3.55 100.30
L3_098_000M1_scaffold_19283
Species: [Eubacterium] eligens (50%)
2 1014 bp 31.16 4.14 100.30
L3_098_000M1_scaffold_19284
Species: Roseburia sp. CAG:18 (100%)
2 1014 bp 47.24 5.03 100.30
L3_098_000M1_scaffold_5435
Species: Dorea longicatena CAG:42 (66.67%)
3 3051 bp 42.67 5.60 100.30
L3_098_000M1_scaffold_5426
Phylum: Firmicutes (66.67%)
3 3054 bp 43.42 6.48 100.30
L3_098_000M1_scaffold_19085
Species: Lachnospiraceae bacterium 5_1_57FAA (50%)
2 1023 bp 55.62 1.47 100.29
L3_098_000M1_scaffold_18962
Species: Firmicutes bacterium CAG:466 (100%)
2 1029 bp 48.30 5.25 100.29
L3_098_000M1_scaffold_18913
Species: Eubacterium sp. 3_1_31 (100%)
2 1032 bp 41.18 4.65 100.29
L3_098_000M1_scaffold_18785
Species: Firmicutes bacterium CAG:424 (50%)
2 1038 bp 46.24 4.19 100.29
L3_098_000M1_scaffold_18792
Species: Roseburia sp. CAG:18 (50%)
2 1038 bp 48.84 4.05 100.29
L3_098_000M1_scaffold_18724
Species: Roseburia sp. CAG:18 (100%)
2 1041 bp 44.96 4.18 100.29
L3_098_000M1_scaffold_7015
Species: Eubacterium sp. 3_1_31 (50%)
2 2435 bp 39.22 5.30 100.29
L3_098_000M1_scaffold_18668 3 1044 bp 34.87 2.59 100.29
L3_098_000M1_scaffold_10220
Species: Eubacterium hallii CAG:12 (50%)
2 1741 bp 36.47 4.82 100.29
L3_098_000M1_scaffold_18416
Species: Roseburia sp. CAG:18 (100%)
2 1056 bp 47.54 4.40 100.28
L3_098_000M1_scaffold_18420
Species: human gut metagenome (50%)
2 1056 bp 53.60 67.05 100.28
L3_098_000M1_scaffold_18287
Species: Dorea sp. CAG:317 (50%)
2 1062 bp 39.83 5.37 100.28
L3_098_000M1_scaffold_18296
Species: Eggerthella sp. HGA1 (66.67%)
3 1062 bp 63.47 2.82 100.28
L3_098_000M1_scaffold_18222
Species: Lachnospiraceae bacterium 3-1 (100%)
2 1065 bp 41.31 3.10 100.28
L3_098_000M1_scaffold_18233
Species: Ruminococcaceae bacterium D16 (50%)
2 1065 bp 53.99 16.62 100.28
L3_098_000M1_scaffold_6855
Species: Eubacterium sp. 3_1_31 (100%)
4 2489 bp 37.61 4.58 100.28
L3_098_000M1_scaffold_12916
Species: Blautia sp. CAG:257 (100%)
2 1427 bp 44.57 6.10 100.28
L3_098_000M1_scaffold_12889
Species: Clostridium bolteae CAG:59 (50%)
2 1430 bp 53.15 3.78 100.28
L3_098_000M1_scaffold_17964
Species: Lachnospiraceae bacterium CAG:364 (50%)
2 1080 bp 47.13 4.44 100.28
L3_098_000M1_scaffold_17727
Species: Clostridium sp. SS2/1 (66.67%)
3 1092 bp 33.88 22.80 100.28
L3_098_000M1_scaffold_12589
Species: Bacteroides sp. 4_1_36 (50%)
2 1457 bp 54.08 11.63 100.28
L3_098_000M1_scaffold_9665
Species: Blautia sp. CAG:257 (100%)
2 1828 bp 46.33 5.33 100.27
L3_098_000M1_scaffold_17558
Species: Bacteroides sp. 2_1_22 (50%)
2 1101 bp 39.24 71.39 100.27
L3_098_000M1_scaffold_17565 3 1101 bp 68.21 3.27 100.27
L3_098_000M1_scaffold_17380
Species: Eubacterium sp. 3_1_31 (100%)
2 1110 bp 32.61 2.97 100.27
L3_098_000M1_scaffold_17334
Species: Blautia sp. CAG:257 (50%)
2 1113 bp 44.20 4.85 100.27
L3_098_000M1_scaffold_9466
Species: Lachnospiraceae bacterium 3-1 (50%)
2 1858 bp 51.45 3.39 100.27
L3_098_000M1_scaffold_9450
Species: Blautia sp. CAG:257 (100%)
2 1861 bp 45.41 4.59 100.27
L3_098_000M1_scaffold_9425
Species: Clostridium sp. CAG:58 (50%)
2 1867 bp 56.51 4.50 100.27
L3_098_000M1_scaffold_12184
Species: Blautia sp. CAG:257 (50%)
2 1496 bp 47.59 5.01 100.27
Displaying items 551-600 of 19418 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.