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L3_101_000M1_public_UNK

In projects: L3_101_000M1_public

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 73.08 Longest contig: 476.23 Kbp Bin length: 125.35 Mbp GC content: 46.96 %
Contigs count: 29891 Features count: 138452 rRNAs count: 18 tRNAs count: 1955

Genome completeness

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 17 / 38 MC: 16
Displaying items 501-550 of 29891 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L3_101_000M1_scaffold_22089
Species: Pseudoflavonifractor capillosus (50%)
2 1280 bp 63.52 2.81 100.78
L3_101_000M1_scaffold_25253
Species: BJP_IG2157_Clostridiales_52_13 (50%)
2 1152 bp 55.73 3.65 100.78
L3_101_000M1_scaffold_25166
Species: Lachnospiraceae bacterium 3-1 (100%)
2 1155 bp 34.81 2.34 100.78
L3_101_000M1_scaffold_29240
Species: Ruminococcus bicirculans (100%)
2 1027 bp 45.37 4.09 100.78
L3_101_000M1_scaffold_29134
Species: Faecalibacterium prausnitzii (50%)
2 1030 bp 41.94 2.91 100.78
L3_101_000M1_scaffold_29151
Species: [Clostridium] asparagiforme (100%)
2 1030 bp 55.92 3.20 100.78
L3_101_000M1_scaffold_21892
Species: Coprobacillus sp. CAG:183 (50%)
2 1289 bp 35.14 3.96 100.78
L3_101_000M1_scaffold_17426
Order: Clostridiales (100%)
3 1548 bp 46.38 4.26 100.77
L3_101_000M1_scaffold_8816
Genus: Eubacterium (66.67%)
3 2709 bp 33.19 12.74 100.77
L3_101_000M1_scaffold_24805
Species: Clostridium sp. FS41 (100%)
2 1170 bp 49.23 4.62 100.77
L3_101_000M1_scaffold_28421
Species: Ruminococcus sp. 5_1_39BFAA (50%)
2 1051 bp 43.01 19.41 100.76
L3_101_000M1_scaffold_14086
Species: Clostridium clostridioforme CAG:132 (100%)
3 1840 bp 51.96 4.65 100.76
L3_101_000M1_scaffold_15365
Species: Ruminococcus sp. CAG:57 (66.67%)
3 1715 bp 44.66 3.24 100.76
L3_101_000M1_scaffold_13996
Species: Eubacterium hallii CAG:12 (100%)
2 1849 bp 39.05 4.38 100.76
L3_101_000M1_scaffold_16882
Species: [Clostridium] asparagiforme (100%)
2 1587 bp 55.89 5.77 100.76
L3_101_000M1_scaffold_18801
Species: Ruminococcus sp. CAG:57 (100%)
2 1456 bp 48.35 5.25 100.76
L3_101_000M1_scaffold_21152
Order: Clostridiales (66.67%)
3 1325 bp 45.13 3.06 100.76
L3_101_000M1_scaffold_6603
Species: Clostridium bolteae CAG:59 (50%)
4 3448 bp 48.00 3.35 100.75
L3_101_000M1_scaffold_7148
Species: Ruminococcaceae bacterium 585-1 (60%)
5 3219 bp 69.84 5.64 100.75
L3_101_000M1_scaffold_20802
Species: Oscillibacter sp. KLE 1745 (75%)
4 1343 bp 53.76 4.24 100.74
L3_101_000M1_scaffold_23602
Species: Dorea formicigenerans (50%)
2 1218 bp 45.89 3.20 100.74
L3_101_000M1_scaffold_23458
Species: Pseudoflavonifractor capillosus (50%)
2 1224 bp 67.65 3.68 100.74
L3_101_000M1_scaffold_27078
Species: Pseudoflavonifractor capillosus (66.67%)
3 1090 bp 70.00 3.03 100.73
L3_101_000M1_scaffold_10633
Species: Clostridium clostridioforme CAG:132 (50%)
2 2323 bp 53.21 3.87 100.73
L3_101_000M1_scaffold_26876
Species: [Ruminococcus] gnavus (50%)
2 1096 bp 47.45 6.30 100.73
L3_101_000M1_scaffold_5181
Species: Faecalibacterium prausnitzii (80%)
5 4247 bp 54.60 23.56 100.73
L3_101_000M1_scaffold_8117
Species: Ruminococcus sp. CAG:60 (66.67%)
3 2892 bp 42.77 5.03 100.73
L3_101_000M1_scaffold_22905
Species: [Eubacterium] hallii (50%)
2 1245 bp 42.89 3.86 100.72
L3_101_000M1_scaffold_26444
Species: Faecalibacterium prausnitzii (100%)
3 1111 bp 57.61 2.70 100.72
L3_101_000M1_scaffold_6176
Order: Clostridiales (83.33%)
6 3640 bp 61.21 6.84 100.71
L3_101_000M1_scaffold_38468
Species: Eubacterium ramulus (100%)
2 1263 bp 47.66 76.60 100.71
L3_101_000M1_scaffold_19622
Species: Clostridium sp. MSTE9 (50%)
2 1406 bp 52.99 3.95 100.71
L3_101_000M1_scaffold_25901
Species: Lachnospiraceae bacterium 3_1_46FAA (50%)
2 1129 bp 55.98 3.72 100.71
L3_101_000M1_scaffold_10152
Order: Clostridiales (66.67%)
3 2410 bp 36.06 8.34 100.71
L3_101_000M1_scaffold_25745
Species: Anaerotruncus colihominis (100%)
4 1135 bp 63.17 2.91 100.71
L3_101_000M1_scaffold_22120
Species: Burkholderia multivorans (50%)
2 1278 bp 34.51 4.23 100.70
L3_101_000M1_scaffold_15463
Species: Bacteroides sp. 4_3_47FAA (50%)
4 1707 bp 48.51 7131.81 100.70
L3_101_000M1_scaffold_19265
Species: Clostridium sp. 7_3_54FAA (50%)
2 1427 bp 50.60 3.99 100.70
L3_101_000M1_scaffold_29936
Species: Firmicutes bacterium CAG:424 (100%)
2 1007 bp 42.60 5.21 100.70
L3_101_000M1_scaffold_29947
Species: Coprobacillus sp. CAG:183 (50%)
2 1007 bp 27.31 3.87 100.70
L3_101_000M1_scaffold_25233 4 1153 bp 37.03 5.59 100.69
L3_101_000M1_scaffold_29840
Species: Ruminococcus bicirculans (100%)
2 1010 bp 39.50 3.71 100.69
L3_101_000M1_scaffold_29635
Species: Bacteroides sp. CAG:144 (50%)
2 1016 bp 40.16 2.36 100.69
L3_101_000M1_scaffold_24936
Species: Lachnospiraceae bacterium 2_1_58FAA (100%)
2 1165 bp 44.38 3.22 100.69
L3_101_000M1_scaffold_21403
Species: [Ruminococcus] gnavus (100%)
2 1311 bp 46.53 4.12 100.69
L3_101_000M1_scaffold_29409
Species: Eubacterium sp. CAG:76 (100%)
2 1022 bp 36.20 3.23 100.69
L3_101_000M1_scaffold_24794
Species: [Eubacterium] eligens (50%)
2 1171 bp 41.42 3.59 100.68
L3_101_000M1_scaffold_29310
Species: [Clostridium] asparagiforme (100%)
2 1025 bp 57.46 2.34 100.68
L3_101_000M1_scaffold_3620
Species: Dorea sp. CAG:317 (100%)
5 5870 bp 42.90 5.60 100.68
L3_101_000M1_scaffold_24583
Species: Lachnospiraceae bacterium 3_1_46FAA (50%)
2 1180 bp 46.86 3.81 100.68
Displaying items 501-550 of 29891 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.