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L3_102_363G1_scaffold_113

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_102_363G1_scaffold_113_1
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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424..2892
DNA (2469bp) protein (823aa)
Bacterial membrane protein YfhO n=1 Tax=Clostridium sp. MSTE9 RepID=J0NAI4_9CLOT
Bacterial membrane protein YfhO {ECO:0000313|EMBL:EJF41602.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L3_102_363G1_scaffold_113_2
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2921..3586)
DNA (666bp) protein (222aa)
potassium transporter TrkA n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003751C3D
Trk system potassium uptake protein TrkA, N-terminal domain protein {ECO:0000313|EMBL:EJF42120.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
K+ transport system, NAD-binding component
L3_102_363G1_scaffold_113_3
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3612..4235)
DNA (624bp) protein (208aa)
NADP oxidoreductase coenzyme F420-dependent n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037AE920
NADP oxidoreductase coenzyme F420-dependent {ECO:0000313|EMBL:EJF42187.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
K+ transport system, NAD-binding component
L3_102_363G1_scaffold_113_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4419..5450)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Clostridium difficile CD160 RepID=T3DI28_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQF27143.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
hypothetical protein
L3_102_363G1_scaffold_113_5
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5597..7000)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=R0BHM0_9CLOT
Collagen triple helix repeat protein {ECO:0000313|EMBL:EDO62037.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Collagen triple helix repeat protein
L3_102_363G1_scaffold_113_6
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7231..8184)
DNA (954bp) protein (318aa)
SufB/sufD domain protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5L0T1_9CLOT
SufB/sufD domain protein {ECO:0000313|EMBL:CCY66682.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
SufBD protein
L3_102_363G1_scaffold_113_7
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8181..8915)
DNA (735bp) protein (245aa)
ABC transporter related n=1 Tax=Clostridium sp. CAG:678 RepID=R5L060_9CLOT
ABC transporter related {ECO:0000313|EMBL:CCY66681.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
ABC transporter
L3_102_363G1_scaffold_113_8
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8903..9424)
DNA (522bp) protein (174aa)
Regulatory protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KIN0_9CLOT
Regulatory protein {ECO:0000313|EMBL:CCY66680.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
MarR family transcriptional regulator
L3_102_363G1_scaffold_113_9
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9640..11610
DNA (1971bp) protein (657aa)
LysM domain protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQ10_9CLOT
LysM domain protein {ECO:0000313|EMBL:EDO62515.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
sporulation-specific glycosylase
L3_102_363G1_scaffold_113_10
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11769..12341)
DNA (573bp) protein (191aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase n=2 Tax=Clostridium RepID=A7VQB6_9CLOT
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CDC05308.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L3_102_363G1_scaffold_113_11
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12412..12975)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDE3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG30529.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L3_102_363G1_scaffold_113_12
Paenibacillus terrae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13271..14002)
DNA (732bp) protein (244aa)
Transmembrane sensor domain-containing protein n=1 Tax=Paenibacillus terrae (strain HPL-003) RepID=G7VQN0_PAETH
transmembrane sensor domain-containing protein
Transmembrane sensor domain-containing protein {ECO:0000313|EMBL:AET61219.1}; TaxID=985665 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus terrae (strain HPL-003).;"
L3_102_363G1_scaffold_113_13
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14498..16192)
DNA (1695bp) protein (565aa)
Phosphomannomutase (EC:5.4.2.8 5.4.2.2)
phosphoglucomutase n=1 Tax=Clostridium sporosphaeroides RepID=UPI000367FBE7
Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I {ECO:0000313|EMBL:EJF41225.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
L3_102_363G1_scaffold_113_14
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16363..16827)
DNA (465bp) protein (155aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
Phosphodiesterase family protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0N9I3_9CLOT
hypothetical protein
L3_102_363G1_scaffold_113_15
Clostridium sp. CAG:557, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16970..17206
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:557 RepID=R6GGY2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB24708.1}; TaxID=1262819 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:557.;"
hypothetical protein
L3_102_363G1_scaffold_113_16
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17225..17761
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6P686_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC05447.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
L3_102_363G1_scaffold_113_17
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17770..18186
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI000375111F
Uncharacterized protein {ECO:0000313|EMBL:EJF41226.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
L3_102_363G1_scaffold_113_18
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18522..19493)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0N344_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EJF41189.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
L3_102_363G1_scaffold_113_19
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19700..20944)
DNA (1245bp) protein (415aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
glutamate-5-semialdehyde dehydrogenase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Clostridium sp. CAG:352 RepID=R6S253_9CLOT
L3_102_363G1_scaffold_113_20
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20974..21768)
DNA (795bp) protein (265aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
glutamate 5-kinase (EC:2.7.2.11)
Glutamate 5-kinase n=2 Tax=Clostridium RepID=A7VR70_9CLOT
L3_102_363G1_scaffold_113_21
Slackia heliotrinireducens, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22151..24319)
DNA (2169bp) protein (723aa)
Uncharacterized protein n=1 Tax=Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) RepID=C7N1C6_SLAHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV21218.1}; TaxID=471855 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029; / RHS 1) (Peptococcus heliotrinreducens).;"
L3_102_363G1_scaffold_113_22
Butyrivibrio proteoclasticus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24316..25209)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316) RepID=E0S4A1_BUTPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL36233.1}; TaxID=515622 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio proteoclasticus (strain ATCC 51982 / DSM 14932 / B316); (Clostridium proteoclasticum).;"
L3_102_363G1_scaffold_113_23
unknown

Not on your lists

comp(25179..25274)
DNA (96bp) protein (32aa)

This feature has no annotations

L3_102_363G1_scaffold_113_24
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

26030..26932
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00035FB3A0
Amidohydrolase 2 {ECO:0000313|EMBL:CDC93618.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
amidohydrolase 2
L3_102_363G1_scaffold_113_25
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26955..27299
DNA (345bp) protein (115aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AFD6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD15000.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_102_363G1_scaffold_113_26
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27396..28274)
DNA (879bp) protein (293aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
Pyridoxal biosynthesis lyase PdxS n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EEG4_9CLOT
pyridoxal phosphate synthase yaaD subunit
L3_102_363G1_scaffold_113_27
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28408..29802
DNA (1395bp) protein (465aa)
Transcriptional regulator n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GR75_EUBLK
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ADO39517.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_102_363G1_scaffold_113_28
unknown

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comp(29950..30147)
DNA (198bp) protein (66aa)

This feature has no annotations

L3_102_363G1_scaffold_113_29
Coprobacillus sp. CAG:826, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(30436..30987)
DNA (552bp) protein (184aa)
Isochorismatase hydrolase n=1 Tax=Coprobacillus sp. CAG:826 RepID=R7DNF6_9FIRM
Isochorismatase hydrolase {ECO:0000313|EMBL:CDD91553.1}; TaxID=1262857 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:826.;"
PncA; nicotinamidase-like amidase
L3_102_363G1_scaffold_113_30
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31134..32525)
DNA (1392bp) protein (464aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EIC8_9CLOT
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EEG28724.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
Displaying items 1-30 of 74 in total

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