ggKbase home page

L3_105_000M1_scaffold_237_18

Organism: L3_105_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 17
Location: comp(22670..23584)

Top 3 Functional Annotations

Value Algorithm Source
truB; tRNA pseudouridine synthase B (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 98.4
  • Coverage: 304.0
  • Bit_score: 599
  • Evalue 5.30e-169
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000313|EMBL:CCO03802.1}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 304.0
  • Bit_score: 599
  • Evalue 2.60e-168
tRNA pseudouridine synthase B n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U999_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 304.0
  • Bit_score: 599
  • Evalue 1.90e-168

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminococcus bicirculans → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 915
ATGAGCTTGGATAACAGCAAGGATAATATCTGCGGCATTTTGCCTGTAAAAAAGCCCGAGGGCTGGACTTCTTTTGACGTTATCGCAAAGCTCAGAGGAGTTCTAAGGATAAAAAGATTGGGTCATTCAGGGACCCTTGACCCTATGGCAACAGGCGTTCTGCCTGTTTTCGTTGGAAGAGCCACAAAAGCCTGTGATATTATCCCCGACAGACGAAAGGTCTATACCGCAGGCTTTCAGCTTGGGGTAAGCACCGATACCTTAGACAGCACAGGAAAGACGTTAAAAACAAGCGACAAGGCAGTTGCCAGAGCCGACCTTGAATGTGCAAAAAGCAGTTTTGTAGGCGATATCATGCAGGTGCCGCCTATGTATTCTGCAATAAAAGTGAACGGCAAAAAGCTCTATGAGCTTGCAAGAGCAGGCAAAGAAATAGAGCGTGAGCCGAGAGCTGTCCATATCGACAGCATTGATATAATAGAATATGACGAAGCTTCACGCAAGGGCGTAATGAAAGTTGATTGCGAAAAAGGTACTTATATACGCTCCGTTATCAGCGACATAGGTGAAAAGCTTGGCTGCGGCGGAATGATGACTTCTCTTGAGCGTTCCTATTCAGGGGGCGTTGATATAAAGGATTGCTATACCATAGAGGAGATAGCCGAAATTTGTGAGCAGGATAAGCTGTCACAAATGCTTATCCCACTTGACAGAGCCTTTGTAAGCTACGAAAAAACTACCCTTGGACAGTGGGAAACAAAGCTTTATAGAAACGGAGTAAAGCTCAGACCTGAGCAGACAGGGATAAAAGATCTGTCAGAGGACAAGCACTACCGTGTCTACGGCAGTGATAACAGCTTCCTGGGTATCGGCACTTTTCATGAGGGCAGTTTCAGAAGCTTCAAAAATTTCTGA
PROTEIN sequence
Length: 305
MSLDNSKDNICGILPVKKPEGWTSFDVIAKLRGVLRIKRLGHSGTLDPMATGVLPVFVGRATKACDIIPDRRKVYTAGFQLGVSTDTLDSTGKTLKTSDKAVARADLECAKSSFVGDIMQVPPMYSAIKVNGKKLYELARAGKEIEREPRAVHIDSIDIIEYDEASRKGVMKVDCEKGTYIRSVISDIGEKLGCGGMMTSLERSYSGGVDIKDCYTIEEIAEICEQDKLSQMLIPLDRAFVSYEKTTLGQWETKLYRNGVKLRPEQTGIKDLSEDKHYRVYGSDNSFLGIGTFHEGSFRSFKNF*