ggKbase home page

L3_105_000M1_scaffold_270_28

Organism: L3_105_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 17
Location: 32145..32687

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-24 subunit ECF subfamily n=1 Tax=Odoribacter splanchnicus CAG:14 RepID=R6F5Q3_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 180.0
  • Bit_score: 356
  • Evalue 1.30e-95
RNA polymerase sigma-24 subunit ECF subfamily {ECO:0000313|EMBL:CDB08463.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 180.0
  • Bit_score: 356
  • Evalue 1.80e-95
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 172.0
  • Bit_score: 148
  • Evalue 1.10e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Odoribacter splanchnicus CAG:14 → Odoribacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 543
ATGCAGAAAAGGGAAAGTAAAGAATTTAAGGAATTTTTCGAACGTTTTTTTATTCCGGTATGTCACTTTATTAAACGATATACGGAAGAGGAGGAAGTGGCCGATATTGCGCAGGAGGTATTTGTAAAAGTGTATGAAAAATGGAATGAATTCGACTCTTTAGGGAATGCCAAGGCTTTTCTGTATATTGCAGCCCGGAATCTTTGTTTAGATTTTATCAAACATAAGAAAGCCGAAGCTAATTATCTGTCTGAGTACATGCATGGAGAAGAAGCGGACGATCCTGTATTCCTAAAAGAAGTTACCCGGCAAGAGACTTTCCGTATCCTGCATACGGCGATCGACAAGCTGCCTGCTCAGAGTAAGCAGATTATTATGCTGAGTATGGAAGGGCTCAGCAATGCCGAAGTAGGAGAAAAACTAGGTATCTCCGTGAATACCGTCAAAACATTGAAAAAGAATGCTTATGCCGTATTGCGGCAGGTTCTTTCGAAGGAATATCTGCTTTTATTATTTGTTATCTTACGTGATTATTCTGCTTAA
PROTEIN sequence
Length: 181
MQKRESKEFKEFFERFFIPVCHFIKRYTEEEEVADIAQEVFVKVYEKWNEFDSLGNAKAFLYIAARNLCLDFIKHKKAEANYLSEYMHGEEADDPVFLKEVTRQETFRILHTAIDKLPAQSKQIIMLSMEGLSNAEVGEKLGISVNTVKTLKKNAYAVLRQVLSKEYLLLLFVILRDYSA*