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L3_105_000M1_scaffold_901_13

Organism: L3_105_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 38 / 38 MC: 17
Location: comp(11115..11894)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKM9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 259.0
  • Bit_score: 420
  • Evalue 7.80e-115
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 259.0
  • Bit_score: 420
  • Evalue 1.10e-114
RNA polymerase, sigma subunit, RpsG/SigG similarity KEGG
DB: KEGG
  • Identity: 69.0
  • Coverage: 255.0
  • Bit_score: 352
  • Evalue 5.70e-95

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Taxonomy

Subdoligranulum variabile → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 780
ATGTATGCTGGAAAAGTAGAACTCTGCGGCGTGGATACCGCCCGCCTGCCGGTGCTGAGCGAAGCCGAAAAAGCCCGCCTTATCAAGGCGGCCCGCGCGGGTGACCGCCAGGCCCGGCAGGAGATGGTGCAGGGCAACCTGCGGCTGGTGCTCAGCGTCGTGCAGAAATTCGCAAGCCGCGGCGAGAATATGGACGACCTGTTCCAGGTGGGCTGCATCGGGCTTATCAAAGCCATCGATAACTTTGACCCGGCGCAGAACGTGCGGTTTTCCACCTACGGCGTGCCGATGATCGTGGGCGAGGTCAAGCGCTACCTGCGGGACAACAACGCCGTGCGGGTCAGCCGCTCCATCCGTGATTTGGCCTACCACTCGATGCAGGCGCGGGAGGAACTGCAAAAGCAGAATGGCCGCGAGCCGAAAATATCCGAGATCGCCGCCAAGGTGGGCCAAAGCCCCGAAAACGTCGCCATGGCGCTGGAATCCGCCGTCACGCCCGCCAGTCTGTACGAGCCGGTCTACTCCGACGGTGAGGACAGCTTTGCCCTGGTGGATCAGCTGCGGGACAACGCAGGCGAGGAAAACTGGATCAGCGATATGATGTTCCGTGATACGGTCAAGGCCCTGACACCCCGGGAACGGCGCATCATCGCGCTGCGGTATCTCCGCGGCCAGACCCAGACCCAGGTGGCGCAGGAAATCGGCATCAGTCAGGCCCAGGTCAGCCGTCTGGAAAAGGCCGCACTAAAGCATATTAAAGAGCAAATCTGCGCGGACTAA
PROTEIN sequence
Length: 260
MYAGKVELCGVDTARLPVLSEAEKARLIKAARAGDRQARQEMVQGNLRLVLSVVQKFASRGENMDDLFQVGCIGLIKAIDNFDPAQNVRFSTYGVPMIVGEVKRYLRDNNAVRVSRSIRDLAYHSMQAREELQKQNGREPKISEIAAKVGQSPENVAMALESAVTPASLYEPVYSDGEDSFALVDQLRDNAGEENWISDMMFRDTVKALTPRERRIIALRYLRGQTQTQVAQEIGISQAQVSRLEKAALKHIKEQICAD*