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L3_105_000M1_scaffold_4187_20

Organism: dasL3_105_000M1_concoct_33_fa

near complete RP 51 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(15972..16205)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED42_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 96.2
  • Coverage: 78.0
  • Bit_score: 144
  • Evalue 4.20e-32
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EBA38473.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.2
  • Coverage: 78.0
  • Bit_score: 144
  • Evalue 5.90e-32
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 67.0
  • Bit_score: 80
  • Evalue 1.60e-13

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Taxonomy

Collinsella aerofaciens → Collinsella → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 234
ATGACTCTTTTTGTCATGGATACGACGCTTCAGAAATCATTCGGCATGAGATGCAAAGAGTTCCGCGCTGGACTCGGGTGCAGTCAGGAGCAGTTCGCCAATTTGATTGAAATGGATCGTTCCTACTACGCGAGCATTGAAGTCGGTCGGCGTAATGTCAGCCTCTCAAATCTCAAGAAGATTGCCGACGGATTTCAAATCACCATTTCGGAGCTCATGCGCGGTGTTGAGTAG
PROTEIN sequence
Length: 78
MTLFVMDTTLQKSFGMRCKEFRAGLGCSQEQFANLIEMDRSYYASIEVGRRNVSLSNLKKIADGFQITISELMRGVE*