ggKbase home page

L3_105_000M1_scaffold_2244_11

Organism: dasL3_105_000M1_concoct_38_sub_fa

near complete RP 45 / 55 BSCG 50 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 14926..17328

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase {ECO:0000256|RuleBase:RU000518}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000313|EMBL:CBK97337.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 800.0
  • Bit_score: 1586
  • Evalue 0.0
Topoisomerase IA (EC:5.99.1.2) similarity KEGG
DB: KEGG
  • Identity: 98.1
  • Coverage: 800.0
  • Bit_score: 1586
  • Evalue 0.0
DNA topoisomerase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JW68_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 800.0
  • Bit_score: 1586
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Eubacterium] siraeum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2403
ATGATAGTAATTTATGCCGAAAAATACAGCCTCGGTCGGACAATTGCCGAGGCTTTAGGCGCATACAAAAAAACAGTGAATCCTAAGGAACCGTCTATCGCACACTGGGACTTAAATCTTAACGGTGAGCAAGCAATCCTTTGTCACGGTGCCGGTCACTTATGCGGTTTAGCTCCGGCTGAAGATTATGACGAACGTTATAAATTCTGGAGCTTCGATAATTACCCGATTATACCCGAATATTTTATTACAAGAGTAAAAGATAATAATTATTCCAGGCTTGCTTATGATTATGTTAAGCAGTTCTTTGATAAGGCGGATCTGATAATCAATGCCACTGATGCAGACCGTGAAGGCGAATTGATTTTTGCGTACTTATATGAAGTGTTGCATTGTACAGTGCCTTATAAACGTGTTTGGATAACAGATTTGACGCCTTTTAAGATCAGAAAGGCATTTGCAGAGTTACGCCCGGCAAAAGATATGAAGCCGCTTGAAAATGCAGGACGTATACGGTCTGCAACAGACTGGCTCGTTGGTATTAACACGTCTGTTGCGGCTACATTGAAATTCGGTGGTACGGATAATGTATTCGCCTGCGGACGTGTAAAAATGCCGACACTCGCAATGATTGTTAAGCGTGAACGGGAAATAAGGAATTATGTTAAAAAGCCGTTTTATAAAATAGTTGCCAATATCGAAGCAACTGACGGCGCAAAGTTTACTGCCGAAGCGGCAGATAAGTACGATACCGAAACGGCGGCAAAGGCTGTTATAGATGAAATTAAATTAAATACGGCAAAAGCGATTAAAGTCGAGGTGTTGCAAAAGCAGACAGCCGCTCCGCTTTTATATAACACTACACATTTGCTTGCTGATTTATCAAAGTGTACGGATCTCACAATTGATATGCTTACAAAGCTCGTTCAGAGCTTGTACGAAAACAGATTGATAACATATCCACGCACAAGCTCGGAGCATCTAACAGATGCAATGAAAGATGAAACGGTAAAGATAATAAAGCTACTGTTTGAAATGCCCGAATTTGCTAAATATGCTATTCCTGTCGACAATTTTGCACCCTGTACACGTCGGCATTATGATGACAGCAAAGTCGATTCGCACACCGCTATTACACCGACCGCTCTTGTGCCGAATGATTTAAGCGGTATGTCAGAAAATGAGCGCAAGGCATATACTTTGCTTGCGTTATCAATTATCCGTACTGTTTATCCGAAAGCTGTTACAGAAAATGTCAAAGCTGTTTTTCAGATTGATAATCAGCTGTTTACAGCAACCGGAACGAATATAATCAGTCCCGGTTGGTTTGCTGTTGATGCAACGCCGAAGGTAATCGGGTTGCCCGAAATCGTTAAGGATAACGATTATAAAGTTATCGGTTTCGATGTCAAAGAGGGACAAAATGAGCCACCGAAGTATTATACCGATGCTACACTGCTTACGGCAATGGAGCTTGCAGGTGATAATATAGAAGATGAACAAACTCGCAACTTAATTAAACTTGAAAAGCGTGGACTGGGAACTGCCGCAACACGTCAAGGTATCATTAAAGAGCTGTATGAAAAAGGCTATATTGCTCGTAGAACCAAAAAAAACGGCAATATGATCAAAGGCATTATGCCAACAGAAAAAGGAATGTATATAATCGATGCACTTGAAAAGACGGTACCCGATATGCTGTCTGTTGATATGACCGGCGATATGGAAATGGAACTTGATAAAATTGCCCGTGGAAAGTCTGACGGAAATGATTTCTTGAATAATTACAAAAAGCTTGTAGCTAAATGGGTAGAGTTAATAAAAAACAGTGATACTTCTGCAATGGCAGGTAACACCCTTATTTGTCCGTTATGCAGTAAACCTTTAATTAAGAAAAAAGTAGGTTGGTGCTGTACAGGTTATTCCAAGGATAACCCGGATAGTTGCAGATTTTATATTGCAAATGAAATCTGCGGTAAAAAAATATCAGATGTAATCGCCAAAGAGCTTACATTGAAACGTTCGACATCTATCATCAAGGGCTTTACATCTCAGAGCGGAAAAACATTTGATGCGAAGCTAACAATCAAAGCAGATAATACGATCGGTTTTGAATTTCCCGAACGTCTTAAATGTCCTGTTTGCGGAAAAGAAATGATAAATAGTTCTAAAGGATGGGTCTGCACCGGCTATAAAAGCGGTTGCAGTTTTTTTATAGCCGGAACTATATGCGGAAAATGTATCACAGAAACGATTGCGGCTATGCTGTGTGCAAATAAACGCACAAGGATAATAAACGGGTTTACATCAAAGGCGGGCAAAGCATTCTCGGCGGCTCTTGTTGTTAAAGACGGCAAGATTGATTTTGATTTTCCCGCCAAGTCGCAGAAACGGAACAAATAA
PROTEIN sequence
Length: 801
MIVIYAEKYSLGRTIAEALGAYKKTVNPKEPSIAHWDLNLNGEQAILCHGAGHLCGLAPAEDYDERYKFWSFDNYPIIPEYFITRVKDNNYSRLAYDYVKQFFDKADLIINATDADREGELIFAYLYEVLHCTVPYKRVWITDLTPFKIRKAFAELRPAKDMKPLENAGRIRSATDWLVGINTSVAATLKFGGTDNVFACGRVKMPTLAMIVKREREIRNYVKKPFYKIVANIEATDGAKFTAEAADKYDTETAAKAVIDEIKLNTAKAIKVEVLQKQTAAPLLYNTTHLLADLSKCTDLTIDMLTKLVQSLYENRLITYPRTSSEHLTDAMKDETVKIIKLLFEMPEFAKYAIPVDNFAPCTRRHYDDSKVDSHTAITPTALVPNDLSGMSENERKAYTLLALSIIRTVYPKAVTENVKAVFQIDNQLFTATGTNIISPGWFAVDATPKVIGLPEIVKDNDYKVIGFDVKEGQNEPPKYYTDATLLTAMELAGDNIEDEQTRNLIKLEKRGLGTAATRQGIIKELYEKGYIARRTKKNGNMIKGIMPTEKGMYIIDALEKTVPDMLSVDMTGDMEMELDKIARGKSDGNDFLNNYKKLVAKWVELIKNSDTSAMAGNTLICPLCSKPLIKKKVGWCCTGYSKDNPDSCRFYIANEICGKKISDVIAKELTLKRSTSIIKGFTSQSGKTFDAKLTIKADNTIGFEFPERLKCPVCGKEMINSSKGWVCTGYKSGCSFFIAGTICGKCITETIAAMLCANKRTRIINGFTSKAGKAFSAALVVKDGKIDFDFPAKSQKRNK*