ggKbase home page

L3_105_000M1_scaffold_10671_2

Organism: dasL3_105_000M1_concoct_68_fa

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 MC: 2 ASCG 14 / 38
Location: comp(1322..1621)

Top 3 Functional Annotations

Value Algorithm Source
Phage phi LC3 family holin n=1 Tax=Clostridium sp. ASF502 RepID=N1ZUZ3_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 84.0
  • Bit_score: 128
  • Evalue 2.30e-27
Phage phi LC3 family holin {ECO:0000313|EMBL:EMZ19731.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 84.0
  • Bit_score: 128
  • Evalue 3.30e-27
holin similarity KEGG
DB: KEGG
  • Identity: 70.7
  • Coverage: 82.0
  • Bit_score: 125
  • Evalue 4.30e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. ASF502 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 300
GTGAGGGTAAATTGGCTCGTAAGGTTGAAAAACAAGACCTTTTGGCTCTCGTTTATTCCGGCGCTGCTGCTTCTGGTACAGGTAATAGCCTCGGTTTTCGGGTATAGTTTGGAGTTCGGGGAGCTGGGGAACAAGCTGCTGGCGGTGGTAAACGCCGTTTTCGCGTTGTTATCCATTCTCGGGATAGTGACAGACCCGACGACGTCGGGAGTTTCCGACAGCGAGAGGGCGATGGGGTATACCGAGCCGAAGACAGACGCGGATACGAATACGGATACGGATACCGAGAGCGTTGATTGA
PROTEIN sequence
Length: 100
VRVNWLVRLKNKTFWLSFIPALLLLVQVIASVFGYSLEFGELGNKLLAVVNAVFALLSILGIVTDPTTSGVSDSERAMGYTEPKTDADTNTDTDTESVD*