ggKbase home page

L3_105_000M1_scaffold_13634_2

Organism: dasL3_105_000M1_concoct_68_fa

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 MC: 2 ASCG 14 / 38
Location: comp(854..2215)

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein radA n=2 Tax=Clostridium RepID=R6NDE2_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 57.6
  • Coverage: 455.0
  • Bit_score: 533
  • Evalue 1.90e-148
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.6
  • Coverage: 455.0
  • Bit_score: 533
  • Evalue 2.60e-148
radA; DNA repair protein RadA homolog similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 454.0
  • Bit_score: 529
  • Evalue 5.90e-148

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium leptum CAG:27 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1362
ATGCCGGCAAAAACTAAAACTGTATTCGTCTGCTCTCAGTGCGGATACACCAGCCCCAAATGGGCCGGGAAATGCTCCGGTTGCGGAGAATGGAACACTATGCAGGAAGAAATAGTATCTGCGGAAAAAAGCAAACCAATGCCGGAAAGCAGAATCTCAAAAATCGCGGCGGCCCCCGTCAAACTTAAAGAAATAGAATATTTTGACGAAAACAGAATCTCCACAGGGATAAAAGAATTCGACAGAGTTCTCGGAGGAGGAATCGTAAAGGGGTCTCTTGTGCTCATCAGCGGAGAGCCCGGCATAGGGAAATCCACGATTTTGCTGCAAATGTGCAAATACATAAACGAAGAAACATCAATATTATATGTTTCGGGAGAAGAATCGCCGAGACAAATCAAAATGAGAGCGGAACGTCTTGAAGTTTCAGGAGAAAATATTACCGTTCTCGCGGAAACGGATATGGCGGCGATAAAAGAAAGAGTACTTGAAAAGAAACCCGGACTTGTAATAATAGACTCAATACAAACGATTTCAAGAGAAGATATTTCATCAGCCCCGGGAAGCGTTAGCCAAGTAAAAGAATGCACAAGCGAATTCATGAGACTTGCGAAAAACAGCGGCATACCTATTTTTCTTATAGGGCACGTAAATAAAGAAGGATCTATAGCGGGGCCGAAAGTTATGGAGCATATGGTGGACGCGGTTCTCTATTTCGAAGGAGAAAGAAGCCTTGATTGCCGAATTTTAAGAGCGGTAAAAAATCGTTTCGGGTCAACGAACGAAATTGGAGTTTTCGAAATGGCAAACGACGGGCTAAGAGAAATAGACAATCCGTCGAAAATGTTTATGCAAGGTAAACCAGAAGGTGTTTCTGGGATAGCTACCGTATCTCTTCTTGAAGGCTCTCGTCCTATAATAGCAGAAATACAGGCACTTGTTTCGTCTACGCCCTTCCCCGCTCCCAGAAGAGTCGCCACAGGATACGATTATAACAGACTTAATTTGCTCATCGCCGTGCTCGAAAAACGTTGCGGGCTTTATTTCGGGTCTTCCGACGCGTATCTTAATATTATCGGAGGTCTGAGAATTTCAGAACCGGCGGCTGACCTCGCGATAGCCACTGCACTCGCGTCGGGACTAAAAGATTTTATAATCCCTTCCGACACGGTTTTAATAGGAGAAATAGGCTTAGCGGGGGAAACAAGAATTGTTTCTTCAATTGACAAACGCATATTAGAAGCTAAAAAATTAGGATTTACGCGATGCGTTATCCCCGCAAAAAATAAACTTTTATCTGAAATAAAAGGTATGGAAATAATAAGAGTATCTTCTCTCAGAGAAGTATTCTCAAAATTATAA
PROTEIN sequence
Length: 454
MPAKTKTVFVCSQCGYTSPKWAGKCSGCGEWNTMQEEIVSAEKSKPMPESRISKIAAAPVKLKEIEYFDENRISTGIKEFDRVLGGGIVKGSLVLISGEPGIGKSTILLQMCKYINEETSILYVSGEESPRQIKMRAERLEVSGENITVLAETDMAAIKERVLEKKPGLVIIDSIQTISREDISSAPGSVSQVKECTSEFMRLAKNSGIPIFLIGHVNKEGSIAGPKVMEHMVDAVLYFEGERSLDCRILRAVKNRFGSTNEIGVFEMANDGLREIDNPSKMFMQGKPEGVSGIATVSLLEGSRPIIAEIQALVSSTPFPAPRRVATGYDYNRLNLLIAVLEKRCGLYFGSSDAYLNIIGGLRISEPAADLAIATALASGLKDFIIPSDTVLIGEIGLAGETRIVSSIDKRILEAKKLGFTRCVIPAKNKLLSEIKGMEIIRVSSLREVFSKL*