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L3_105_000M1_scaffold_5260_5

Organism: dasL3_105_000M1_metabat_metabat_55_fa_fa

near complete RP 50 / 55 BSCG 51 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(4225..5118)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.5
  • Coverage: 279.0
  • Bit_score: 232
  • Evalue 6.30e-58
truB; tRNA pseudouridine synthase B (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 288.0
  • Bit_score: 231
  • Evalue 2.20e-58
tRNA pseudouridine synthase B n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NTY4_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 45.5
  • Coverage: 279.0
  • Bit_score: 232
  • Evalue 4.50e-58

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Taxonomy

Pseudoflavonifractor capillosus → Pseudoflavonifractor → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 894
GTGAGCGCGCTGGACGGATTTTTGAATGTGTACAAGCCGCTGGGCATCTCTTCCGCCGGAGTGGTGGGACGCGTGAAGCGCATACTGCCGCGCGGCACCGCGATCGGGCACGGCGGCACGCTGGATCCGGAAGCGGAAGGCGTTTTGCCCCTGTGCGTGGGCAAGGCCACCCGGCTGTTTGATTATATCGTCGATAAGCAAAAGCGCTATATCGCGGAAGTGACGTTGGGCAAGGTGACGGACACGCAGGACGCCGCGGGCACGGTGCTGGAGGAGCGTCCGGTGCGCGTGGGCGAGGCGGAGATCCGGGCCGCGCTGCCCCAGTTGACGGGCGATATTTTGCAGCGCCCGCCCCTGTATTCCGCGCTCAAGCGCGATGGCAAACCGCTGTACGCTTACGCGCGCAAGGGGCAGGAAATCGCGGTCGCCCCGCGCCCCGTGCGCGTGGACGCGCTGGAGCTGCTGGGCTGCACGGGCGAAAACCGCTACGAGATTCGCGTGGATTGCGGCAAGGGCGTGTATGTGCGCACGCTGATGCACGATTTGGGCGCGCTGCTGGGTTGCGGGGGATATATGTCGCGCCTGGCGCGCGTGCGGGCCGGTGCGTTTCGCGCGGAAGACGCCATCGCGCTGGACGCGCTGAGCGATGTGGAAGCCCATCTGCTGCCGTTGGATTTCCCCATTGGGCACATTCCGCTGGTGCGCGTGGGCGAAGGTGAACTGCGCCGCGTGCAAAACGGCAATCCGCTGTACGCGCGTTCGCTGCTGGAAGCGCCACAGGCGCGCGAAGGAATCGTGCGGGTGTATGTGGGGGACGCGTTTGCTGGAATGGGAGAGTTTCAGGAAGACGGCAGCGTGCGCTTTCGGGCCATGCTCCTGGAAAAAAGGCTATGA
PROTEIN sequence
Length: 298
VSALDGFLNVYKPLGISSAGVVGRVKRILPRGTAIGHGGTLDPEAEGVLPLCVGKATRLFDYIVDKQKRYIAEVTLGKVTDTQDAAGTVLEERPVRVGEAEIRAALPQLTGDILQRPPLYSALKRDGKPLYAYARKGQEIAVAPRPVRVDALELLGCTGENRYEIRVDCGKGVYVRTLMHDLGALLGCGGYMSRLARVRAGAFRAEDAIALDALSDVEAHLLPLDFPIGHIPLVRVGEGELRRVQNGNPLYARSLLEAPQAREGIVRVYVGDAFAGMGEFQEDGSVRFRAMLLEKRL*