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L3_106_000G1_scaffold_1177

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_106_000G1_scaffold_1177_1
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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124..438
-----------------
DNA (315bp)
protein (105aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D2P9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG54394.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L3_106_000G1_scaffold_1177_2
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

751..1302
-----------------
DNA (552bp)
protein (184aa)
Translation initiation factor IF-3 n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D2Q1_9CLOT
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
translation initiation factor IF-3
L3_106_000G1_scaffold_1177_3
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1331..1528
-----------------
DNA (198bp)
protein (66aa)
50S ribosomal protein L35 n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D2Q2_9CLOT
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
LSU ribosomal protein L35P
L3_106_000G1_scaffold_1177_4
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1558..1914
-----------------
DNA (357bp)
protein (119aa)
50S ribosomal protein L20 n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D2Q3_9CLOT
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
LSU ribosomal protein L20P
L3_106_000G1_scaffold_1177_5
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2073..2267)
-----------------
DNA (195bp)
protein (65aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D2Q5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG54400.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
L3_106_000G1_scaffold_1177_6
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2545..3219
-----------------
DNA (675bp)
protein (225aa)
Nodulation ATP-binding protein I n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D2Q6_9CLOT
Nodulation ATP-binding protein I {ECO:0000313|EMBL:EEG54401.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
ABC-type multidrug transport system, ATPase component
L3_106_000G1_scaffold_1177_7
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3268..5517
-----------------
DNA (2250bp)
protein (750aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D2Q7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG54402.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L3_106_000G1_scaffold_1177_8
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5566..6747
-----------------
DNA (1182bp)
protein (394aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D321_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG54269.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L3_106_000G1_scaffold_1177_9
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6744..7847
-----------------
DNA (1104bp)
protein (368aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D322_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG54270.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L3_106_000G1_scaffold_1177_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8235..9872
-----------------
DNA (1638bp)
protein (546aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VIE5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY90440.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L3_106_000G1_scaffold_1177_11
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

10154..10936
-----------------
DNA (783bp)
protein (261aa)
Histidinol phosphate phosphatase HisJ family id=3717052 bin=GWF2_Clostridiales_38_85 species=Pseudoflavonifractor capillosus genus=Pseudoflavonifractor taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
HisJ family histidinol phosphate phosphatase
Tax=GWF2_Clostridiales_38_85_curated
L3_106_000G1_scaffold_1177_12
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11092..11424)
-----------------
DNA (333bp)
protein (111aa)
DNA-binding family protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D323_9CLOT
DNA-binding family protein {ECO:0000313|EMBL:EEG54271.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L3_106_000G1_scaffold_1177_13
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

11591..11923
-----------------
DNA (333bp)
protein (111aa)
adenylyl cyclase class-3/4/guanylyl cyclase id=14628584 bin=bin8_Chloro species=Verrucosispora maris genus=Verrucosispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
putative virion core protein (lumpy skin disease virus)
Tax=CSP1_4_Chloroflexi
L3_106_000G1_scaffold_1177_14
unknown

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11920..12207
-----------------
DNA (288bp)
protein (96aa)

This feature has no annotations

L3_106_000G1_scaffold_1177_15
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12224..12610
-----------------
DNA (387bp)
protein (129aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5T713_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ61358.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L3_106_000G1_scaffold_1177_16
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12607..14985
-----------------
DNA (2379bp)
protein (793aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TDK6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ61359.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L3_106_000G1_scaffold_1177_17
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15466..16464
-----------------
DNA (999bp)
protein (333aa)
Sugar-binding domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SIJ3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05015.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
LacI family transcriptional regulator
L3_106_000G1_scaffold_1177_18
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16525..17643
-----------------
DNA (1119bp)
protein (373aa)
Periplasmic binding protein/LacI transcriptional regulator n=3 Tax=Clostridium RepID=E7GI96_CLOSY
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:EGA95512.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
periplasmic binding protein/LacI transcriptional regulator
L3_106_000G1_scaffold_1177_19
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17783..19285
-----------------
DNA (1503bp)
protein (501aa)
ribose import ATP-binding protein RbsA (EC:3.6.3.17)
D-ribose transport system ATP-binding protein n=3 Tax=Clostridium RepID=E7GI95_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05017.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_106_000G1_scaffold_1177_20
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19282..20259
-----------------
DNA (978bp)
protein (326aa)
Branched-chain amino acid ABC transporter, permease protein n=3 Tax=Clostridium RepID=E9SIJ6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05018.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
permease component of ribose/xylose/arabinose/galactoside ABC-type transporters
L3_106_000G1_scaffold_1177_21
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20281..21315
-----------------
DNA (1035bp)
protein (345aa)
Oxidoreductase, NAD-binding domain protein n=4 Tax=Clostridium RepID=E9SIJ7_CLOSY
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:ERI77184.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
oxidoreductase domain containing protein
L3_106_000G1_scaffold_1177_22
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21326..22081
-----------------
DNA (756bp)
protein (252aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FEV0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF05020.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
sugar phosphate isomerase/epimerase
Displaying 22 items

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