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L3_108_000G1_public_UNK

In projects: L3_108_000G1_public
Displaying items 301-350 of 48767 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L3_108_000G1_scaffold_46797
Species: Rothia mucilaginosa (100%)
2 1055 bp 58.48 3.41 35.26
L3_108_000G1_scaffold_23947
Species: [Clostridium] clostridioforme (66.67%)
3 1956 bp 39.52 12.58 35.28
L3_108_000G1_scaffold_29278
Species: Clostridium baratii (100%)
1 1624 bp 27.34 444.74 35.28
L3_108_000G1_scaffold_29320
Species: Bacteroides dorei (100%)
1 1622 bp 33.72 4.81 35.33
L3_108_000G1_scaffold_19694 4 2342 bp 41.25 125.47 35.35
L3_108_000G1_scaffold_39410
Species: [Clostridium] symbiosum (100%)
1 1236 bp 52.75 18.33 35.44
L3_108_000G1_scaffold_47066
Species: Clostridium perfringens (100%)
1 1049 bp 23.55 1287.51 35.46
L3_108_000G1_scaffold_37221
Species: [Clostridium] symbiosum (50%)
2 1302 bp 39.71 4.03 35.48
L3_108_000G1_scaffold_35963
Species: Staphylococcus aureus (100%)
1 1343 bp 37.01 36.75 35.52
L3_108_000G1_scaffold_27664
Order: Clostridiales (100%)
3 1712 bp 35.05 704.09 35.57
L3_108_000G1_scaffold_46822
Species: Parabacteroides merdae (100%)
1 1054 bp 37.38 4.55 35.58
L3_108_000G1_scaffold_61453
Species: Streptococcus vestibularis (50%)
2 1280 bp 39.84 381.56 35.63
L3_108_000G1_scaffold_48613
Species: Erysipelotrichaceae bacterium 3_1_53 (100%)
1 1018 bp 28.49 4.27 35.66
L3_108_000G1_scaffold_66902
Species: Staphylococcus epidermidis (100%)
2 1051 bp 29.88 520.22 35.68
L3_108_000G1_scaffold_14930
Species: Oscillibacter sp. KLE 1745 (100%)
3 3017 bp 56.58 6.36 35.70
L3_108_000G1_scaffold_55535
Species: Clostridium perfringens (100%)
2 1293 bp 25.75 1448.38 35.73
L3_108_000G1_scaffold_64059
Species: Clostridium perfringens (100%)
1 1082 bp 25.23 1385.91 35.77
L3_108_000G1_scaffold_33100
Species: Staphylococcus epidermidis (66.67%)
3 1450 bp 29.03 112.14 35.79
L3_108_000G1_scaffold_26811
Species: Lachnospiraceae bacterium 7_1_58FAA (50%)
2 1766 bp 44.73 19.88 35.84
L3_108_000G1_scaffold_41626
Species: Parabacteroides merdae (100%)
1 1175 bp 40.85 4.09 36.00
L3_108_000G1_scaffold_35643
Species: Streptococcus salivarius (50%)
2 1354 bp 36.78 54.73 36.12
L3_108_000G1_scaffold_82009
Species: Enterobacter sp. 35683 (100%)
1 1011 bp 46.29 6427.00 36.20
L3_108_000G1_scaffold_41910
Species: Blautia sp. KLE 1732 (100%)
1 1167 bp 38.47 6.94 36.25
L3_108_000G1_scaffold_56741
Species: Klebsiella pneumoniae (100%)
1 1117 bp 44.94 2216.29 36.26
L3_108_000G1_scaffold_39643
Species: Firmicutes bacterium CAG:194 (50%)
2 1229 bp 35.56 4.39 36.37
L3_108_000G1_scaffold_42116
Species: Streptococcus sp. ACS2 (50%)
2 1162 bp 28.06 104.30 36.40
L3_108_000G1_scaffold_17185
Species: Coprobacillus sp. 8_2_54BFAA (50%)
2 2644 bp 34.27 1144.46 36.42
L3_108_000G1_scaffold_38368
Species: [Clostridium] clostridioforme (50%)
2 1268 bp 35.65 5.91 36.44
L3_108_000G1_scaffold_48513
Species: Bacteroides sp. 2_1_22 (100%)
1 1020 bp 42.06 18.97 36.47
L3_108_000G1_scaffold_18748
Genus: Staphylococcus (75%)
4 2445 bp 29.69 10.00 36.56
L3_108_000G1_scaffold_35977
Species: Peptoclostridium difficile (50%)
2 1343 bp 60.09 78.52 36.63
L3_108_000G1_scaffold_38597
Species: Coprobacillus sp. 29_1 (100%)
1 1260 bp 31.03 35.83 36.67
L3_108_000G1_scaffold_24533
Species: Parabacteroides merdae CAG:48 (100%)
3 1913 bp 34.76 4.63 36.70
L3_108_000G1_scaffold_59280
Species: Clostridium perfringens (100%)
2 1454 bp 21.87 1116.23 36.73
L3_108_000G1_scaffold_40098
Species: Bacteroides dorei (100%)
2 1217 bp 46.01 7.15 36.73
L3_108_000G1_scaffold_41600
Species: Pseudoflavonifractor capillosus (100%)
1 1175 bp 50.81 87.19 36.77
L3_108_000G1_scaffold_16855
Species: Oscillibacter valericigenes (50%)
2 2689 bp 38.56 10.10 36.82
L3_108_000G1_scaffold_48205
Species: Streptococcus constellatus (100%)
1 1026 bp 46.98 149.42 36.84
L3_108_000G1_scaffold_43146
Species: Bacteroides dorei (50%)
2 1137 bp 34.83 4.75 36.94
L3_108_000G1_scaffold_51023
Species: Clostridium perfringens (100%)
3 2092 bp 22.85 999.95 37.00
L3_108_000G1_scaffold_28157
Species: Lactococcus lactis (100%)
2 1686 bp 34.93 9.16 37.01
L3_108_000G1_scaffold_28002
Species: Prevotella timonensis (100%)
1 1694 bp 43.86 10.80 37.01
L3_108_000G1_scaffold_47286
Species: [Clostridium] bolteae (50%)
2 1045 bp 39.33 5.60 37.03
L3_108_000G1_scaffold_45017
Species: Klebsiella variicola (100%)
1 1093 bp 48.12 891.35 37.05
L3_108_000G1_scaffold_45041
Species: Firmicutes bacterium CAG:24 (100%)
1 1093 bp 46.57 32.11 37.05
L3_108_000G1_scaffold_32748
Species: [Clostridium] bolteae (100%)
1 1465 bp 50.85 6.55 37.06
L3_108_000G1_scaffold_9798 8 4447 bp 43.09 7.72 37.17
L3_108_000G1_scaffold_33247
Species: Clostridium perfringens (100%)
1 1444 bp 22.30 1432.27 37.19
L3_108_000G1_scaffold_37129
Species: Parabacteroides merdae CAG:48 (50%)
2 1305 bp 36.63 3.68 37.24
L3_108_000G1_scaffold_48385
Species: Streptococcus thermophilus (50%)
2 1023 bp 36.66 18.33 37.24
Displaying items 301-350 of 48767 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.