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L3_108_000G1_scaffold_2534

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_108_000G1_scaffold_2534_1
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(115..1524)
DNA (1410bp) protein (470aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HNQ2_9FIRM
miaB; isopentenyl-adenosine A37 tRNA methylthiolase
L3_108_000G1_scaffold_2534_2
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(1754..2845)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HA98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26433.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L3_108_000G1_scaffold_2534_3
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(2826..3323)
DNA (498bp) protein (166aa)
RNA polymerase sigma factor n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HEP6_9FIRM
RNA polymerase sigma factor {ECO:0000313|EMBL:CCY26559.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
RNA polymerase sigma factor
L3_108_000G1_scaffold_2534_4
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(3586..4353)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HTS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY27906.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L3_108_000G1_scaffold_2534_5
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(4350..4907)
DNA (558bp) protein (186aa)
Acetyltransferase GNAT family n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HIE9_9FIRM
Acetyltransferase GNAT family {ECO:0000313|EMBL:CCY27904.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
acetyltransferase
L3_108_000G1_scaffold_2534_6
unknown

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4974..5111
DNA (138bp) protein (46aa)

This feature has no annotations

L3_108_000G1_scaffold_2534_7
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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5165..5608
DNA (444bp) protein (148aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160974}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160970};; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HSW8_9FIRM
D-tyrosyl-tRNA(Tyr) deacylase
L3_108_000G1_scaffold_2534_8
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

5676..6293
DNA (618bp) protein (206aa)
Metallo-beta-lactamase family protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HDU3_9FIRM
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:CCY27900.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L3_108_000G1_scaffold_2534_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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6290..7747
DNA (1458bp) protein (486aa)
hemZ; coproporphyrinogen III oxidase (EC:1.3.99.22)
Coproporphyrinogen dehydrogenase HemZ n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YXB3_9FIRM
Coproporphyrinogen dehydrogenase HemZ {ECO:0000313|EMBL:EHM37757.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_108_000G1_scaffold_2534_10
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

7832..8770
DNA (939bp) protein (313aa)
Phosphoribulokinase/uridine kinase family protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HW37_9FIRM
Phosphoribulokinase/uridine kinase family protein {ECO:0000313|EMBL:CCY28736.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
putative phosphotransferase
L3_108_000G1_scaffold_2534_11
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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8834..9667
DNA (834bp) protein (278aa)
Nucleotide-binding protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HVB7_9FIRM
Nucleotide-binding protein {ECO:0000313|EMBL:CCY28737.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L3_108_000G1_scaffold_2534_12
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

9738..10499
DNA (762bp) protein (254aa)
Exodeoxyribonuclease III n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HGP7_9FIRM
Exodeoxyribonuclease III {ECO:0000313|EMBL:CCY28738.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
exodeoxyribonuclease III Xth
L3_108_000G1_scaffold_2534_13
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(10560..10910)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HG39_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY28740.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L3_108_000G1_scaffold_2534_14
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(11288..11653)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HW41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY28741.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L3_108_000G1_scaffold_2534_15
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(11909..12772)
DNA (864bp) protein (288aa)
Putative magnesium and cobalt transporter n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HGQ2_9FIRM
Putative magnesium and cobalt transporter {ECO:0000313|EMBL:CCY28743.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
putative magnesium and cobalt transporter
L3_108_000G1_scaffold_2534_16
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists


comp(12936..14738)
DNA (1803bp) protein (601aa)
aspS1; Aspartate-tRNA ligase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HG43_9FIRM
Aspartate--tRNA ligase {ECO:0000313|EMBL:CCY28745.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L3_108_000G1_scaffold_2534_17
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(14898..15401)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HVD0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY28747.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L3_108_000G1_scaffold_2534_18
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(15398..15925)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HKT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY28749.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L3_108_000G1_scaffold_2534_19
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(15976..16464)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HGR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY28763.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L3_108_000G1_scaffold_2534_20
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists


comp(16605..17963)
DNA (1359bp) protein (453aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HG63_9FIRM
Displaying 20 items

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