ggKbase home page

dasL3_108_103G1_concoct_59_sub_fa

L3_108_103G1_public_Coriobacteriaceae_bacterium_BV3Ac1_49_30
In projects: L3_108_103G1_public

Consensus taxonomy: Coriobacteriaceae bacterium BV3Ac1  →  Coriobacteriales  →  Coriobacteriia  →  Actinobacteria  →  Bacteria

Displaying 30 items
contig # features sequence size GC content (%) Cov Coding Density (%)
L3_108_103G1_scaffold_18
Species: Coriobacteriaceae bacterium BV3Ac1 (87.84%)
222 241773 bp 49.82 35.37 87.36
L3_108_103G1_scaffold_13
Species: Coriobacteriaceae bacterium BV3Ac1 (89.55%)
220 262040 bp 48.79 28.91 89.32
L3_108_103G1_scaffold_23
Species: Coriobacteriaceae bacterium BV3Ac1 (74.84%)
159 207395 bp 47.52 31.03 91.45
L3_108_103G1_scaffold_34
Species: Coriobacteriaceae bacterium BV3Ac1 (82.69%)
156 175605 bp 48.89 25.72 90.76
L3_108_103G1_scaffold_75
Species: Coriobacteriaceae bacterium BV3Ac1 (50.44%)
113 115479 bp 49.57 27.59 89.57
L3_108_103G1_scaffold_61
Species: Coriobacteriaceae bacterium BV3Ac1 (85.59%)
111 126853 bp 52.29 33.44 88.29
L3_108_103G1_scaffold_70
Species: Coriobacteriaceae bacterium BV3Ac1 (68.42%)
95 117420 bp 47.83 27.35 90.40
L3_108_103G1_scaffold_120
Species: Coriobacteriaceae bacterium BV3Ac1 (96.25%)
80 87602 bp 47.76 25.24 89.24
L3_108_103G1_scaffold_151
Species: Coriobacteriaceae bacterium BV3Ac1 (93.94%)
66 75783 bp 47.89 24.83 93.05
L3_108_103G1_scaffold_166
Species: Coriobacteriaceae bacterium BV3Ac1 (61.9%)
63 71782 bp 48.31 34.86 91.02
L3_108_103G1_scaffold_183
Species: Coriobacteriaceae bacterium BV3Ac1 (94.64%)
56 65576 bp 49.58 35.35 89.58
L3_108_103G1_scaffold_222
Species: Coriobacteriaceae bacterium BV3Ac1 (94.55%)
55 56162 bp 46.41 24.02 89.59
L3_108_103G1_scaffold_510
Order: Coriobacteriales (65.22%)
46 28611 bp 50.35 27.61 94.96
L3_108_103G1_scaffold_408
Species: Coriobacteriaceae bacterium BV3Ac1 (96.88%)
32 33556 bp 46.84 25.69 94.15
L3_108_103G1_scaffold_407
Species: Coriobacteriaceae bacterium BV3Ac1 (90.32%)
31 33666 bp 49.13 27.15 89.94
L3_108_103G1_scaffold_446
Species: Coriobacteriaceae bacterium BV3Ac1 (92.86%)
28 31798 bp 48.73 35.28 84.93
L3_108_103G1_scaffold_822
Species: Coriobacteriaceae bacterium BV3Ac1 (95%)
20 18623 bp 47.02 25.06 92.68
L3_108_103G1_scaffold_798
Species: Coriobacteriaceae bacterium BV3Ac1 (89.47%)
19 19271 bp 49.32 28.71 91.58
L3_108_103G1_scaffold_1046
Species: Atopobium sp. BS2 (62.5%)
16 14511 bp 42.40 8.59 85.57
L3_108_103G1_scaffold_1146
Species: Coriobacteriaceae bacterium BV3Ac1 (100%)
11 13388 bp 48.18 30.18 81.70
L3_108_103G1_scaffold_1003
Class: Coriobacteriia (63.64%)
11 15144 bp 54.78 26.46 92.27
L3_108_103G1_scaffold_1385
Class: Coriobacteriia (71.43%)
7 11052 bp 52.69 32.79 81.43
L3_108_103G1_scaffold_1836
Species: Atopobium sp. BS2 (60%)
5 8174 bp 44.01 8.00 85.29
L3_108_103G1_scaffold_3339
Genus: Atopobium (100%)
5 4569 bp 56.03 5.98 76.89
L3_108_103G1_scaffold_6370
Species: Firmicutes bacterium CAG:114 (50%)
2 2581 bp 47.46 35.28 91.13
L3_108_103G1_scaffold_13905
Species: Collinsella sp. 4_8_47FAA (100%)
1 1304 bp 52.68 234.32 72.70
L3_108_103G1_scaffold_15293
Species: Firmicutes bacterium CAG:114 (100%)
1 1203 bp 52.54 30.92 93.02
L3_108_103G1_scaffold_7451
Species: Firmicutes bacterium CAG:114 (100%)
1 2245 bp 53.36 28.66 96.35
L3_108_103G1_scaffold_6321
Species: Lachnospiraceae bacterium A2 (100%)
1 2599 bp 38.36 28.34 70.41
L3_108_103G1_scaffold_6591
Species: Firmicutes bacterium CAG:114 (100%)
1 2508 bp 51.79 31.46 97.61
Displaying 30 items

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.