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L3_114_000M1_scaffold_10_2

Organism: dasL3_114_000M1_concoct_40_fa

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38
Location: comp(765..4193)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 1142.0
  • Bit_score: 2244
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q7L9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 1142.0
  • Bit_score: 2244
  • Evalue 0.0
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 41.4
  • Coverage: 1127.0
  • Bit_score: 897
  • Evalue 2.70e-258

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Taxonomy

Coprobacillus sp. CAG:235 → Coprobacillus → Erysipelotrichales → Erysipelotrichia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3429
ATGAAAAAGATACTACATTTATTAAAAGATAATAAAGCATTTAATGCTTTATTGAATAAACAAAATATCGTTGTCAATTCTTCCAACAGCGAAGCGCTACTGATTGCTAGCGCATTTTTGACTTTAAAAAAAGATATGCTGATTGTTAAATCAAACCAATATGAAGCTAATCTTCTTTATAAACAAGTTTCTCAAATGATTGATGAAGCCCTTTATTTTCCTGTAGATGAATCTTATCGTATTGAAAGTTTGGCCGCTTCAGGAGAATTATTAGGACAAAGATTAGGAACGATGTATCAACTTACACGACCTGGTCCACATCTTTTGATCAGTCATGGTCATAGTGTGATGCGATATGTTCCAACTGTTGATGTTTTTAAGAAAAACTGTATGACTTTAAAAGTAGGAGATCATATTGATGTTTATGATTTACAAAGATTTTTAGTGCAAGCAGGTTATATGCATACAACACGTGTTGATCAACCTTTCTATTTTTCTAAACGTGGGGGAGTCGTTGATATTTTTTCAATGCAATATGACCATCCTATTCGTATCGATTTCTTTGATGATGAAATTGATTATATTAAATTTTTTGATGAAAAAACACAAAGAACGATTGAAAAAGTGGATGAAATTGAAATTATTCCAGCTACCGATCTTCTTTATTTAGATCAAGAAGTAGGTTCAGTTGTTACACAAATCAAAGATTCTTTTGAAGAACAATATCAAAAGATGGATGATTTATTTAAAGATGATTTTGAAGAAAAAATCATGATCGATATTGAAAACTTAAAAGCACATGCTACAGATAGTAGTCAATATGCGTATTATCATCTCTTTAAAAATGTGACGAGTATTAAAGATTATTTAGATGATCCAATTACTATTTTATGTCAAGAAGAAGATATTCATTTTCAAATCAAAAACTATATTTCAGAAAACTTCTATTATTATCAAGAATTAAGCCAAAGTGGACGCTTTTTAAAAGATAATCAACTTTATCAAGACTTTGATAGCATTATTAAAGATAACTATCAAGCTATTAATACCTTTACAACAAATAAAGATGATGTTGTCTTTTTAAGTCACGATGTGATGTTTAATCGAGATGATGAAAAACGTGTCATCCAACAAATCAATGATTATTTAAAGAATAGTCAAATTTTAATTTCTCTAGAAAATAAACATCAACTTCAATTGATGGTGGAACTTTTTGATCGTCATGAAATGAAATATACACTTGTAGGAATTGATGAAGTAATTTATCCAGGTATTAATCTTTATGTAGGAAAACTTGCATTAGGATTAGAACTTATTGAAGAAAAAGTAGTTATTTTAACAGCCAATGAATTATTTGGAAAAGTCAATGTTTCTAAAACAAAATATTTTAGATTTAAAGATGCTAAAACATTACGTAACTTCCAGGAATTAAATGTTGGTGATTATGTTGTTCATGATAGCTATGGAATAGGGCAATATTTAGGAATTAAAACACTTGATGTTAAAGGATATCATAAAGATTATTTATATGTGGCTTATGCTGGAGATGATACGCTTTATATTCCAGTTGAACAATTTAAAATGATTCGTAAGTATGCAAGTGCTGATGGTAAAGTACCAATGATCCATGCTCTTGGAAGTAGCAAATGGACAAAAGCTAAACAAAAGGCTAAAAATAAAATTGATGATATTGCTGATCGATTAATAGAATTATATGCTAAAAGAATGTCTTCACCAGGGTTTGCTTTTTCTAAGGATAATGAATTACAAATCGATTTTGAAAATCAATTTGGTTATGCTTTAACTGCTGATCAACAAAGAAGTGTTGATGAGATTAAATTGGATATGGAAAAACCCCAACCAATGGATCGTCTTTTATGTGGAGATGTTGGTTTTGGTAAAACTGAAGTGGCCTTACGTGGTGCTTTTAAAGCAATTTTAGATCATAAACAAGTAGCTTTTCTTTGTCCAACAACTATTTTATCAATGCAACATTTTAAAACAGCCACCGAACGTTTTAAAAATTTCCCTGTAGAAATTGCTTTACTCAATCGTTTTACTTCATCTAAAGAAAAGAAACGTATTTTAAAAGAAGTTAAAGAAGGTAAAATTGATTTATTAATAGGAACACATCGTATTTTATCAAAAGATGTCGCGTTTAATGATTTAGGGTTACTTGTTATCGATGAAGAACAACGTTTTGGTGTTAAACAAAAAGAAAAAATCAAAGAATACCGTGAAACCATTGATGTTCTTTCTCTTTCAGCTACACCAATTCCTCGTACATTACAAATGTCTTTAATGGGAATTAGAGGATTATCGAAAATCGATACACCACCTAAAAATAGATTACCTGTACAAACTTATGTTGTTGAAAAAAATAATACGTTAATTAAACAAGTTATTGAAAGAGAACTCGCTAGGGATGGACAAGTTTTCTATCTTTATAATCGAACAGATCAAATCGCTAATGTAGCTTATAAAATTTCTTCTACTGTTCCTAATGCAAAAGTAGCTATAGGACATGGTCAAATGGATAAAAATGAACTAGAAGATGTTATGCTTCGTTTTATGAATAAAGAATTTAATGTTCTTATTTGTACAACAATTATTGAAACAGGAATTGATATTCCTAATGCCAATACGATGATTGTTGAAGATGCTGATAAATTTGGGTTAGCCCAACTTTATCAAATTAGAGGACGTGTAGGTCGTAGTGAAAGAGGCGCTTATACTTATCTTCTTTATAAAAAAGATAAGTCTATTCAAGATGATGCATTAAAACGTTTAAAAGCGATTAAAGAATTTACTGAACTTGGTAGTGGTTATAAAATTGCCATGCGTGATTTATCAATTCGTGGTTCAGGAGATATTCTTGGGGGTAAACAAGCTGGGTTTATTGATGATATTGGTTTTGAAATGTATATGAAGATCTTACAAGATGCCATCAATGTAAGAATGCATAAAGATGAAAAGCCTGAAGAAGAAGTTAAAAACTTAAATGTGAGTGTAGATGGTTATATTCCTGATGACTATGTAGAAAGTGATTATGAAAAACTTGAATTGTATCAAAGATTAGATAAAGCAAAAACAATGACTGAACTTAATAGTTTAAAAGCAGAATTTGATGATTATTATGGAAATTTACCGGAAGCTATTTTAACATTGATTGAAAAGAGAAAACTTGAAATTCTTTCACATTATTCTATTATTGAAGATATTAAAGATTCTGGTAAACAACTAGAAATTATCTTTTCACCAAATGCTTTTGAAACAATTTCAGGTGATAAATTATTCTTGCTTGCTAATCAACTTTTTACAAAGCCAGCCTTTAAATCTTTAGATAATAAAATAACAATTAAAATCAATAAACATGATCAATGGCTTAATCGTTTAAATGAGTTTATTGAAACGTTATCAAAAAAATAA
PROTEIN sequence
Length: 1143
MKKILHLLKDNKAFNALLNKQNIVVNSSNSEALLIASAFLTLKKDMLIVKSNQYEANLLYKQVSQMIDEALYFPVDESYRIESLAASGELLGQRLGTMYQLTRPGPHLLISHGHSVMRYVPTVDVFKKNCMTLKVGDHIDVYDLQRFLVQAGYMHTTRVDQPFYFSKRGGVVDIFSMQYDHPIRIDFFDDEIDYIKFFDEKTQRTIEKVDEIEIIPATDLLYLDQEVGSVVTQIKDSFEEQYQKMDDLFKDDFEEKIMIDIENLKAHATDSSQYAYYHLFKNVTSIKDYLDDPITILCQEEDIHFQIKNYISENFYYYQELSQSGRFLKDNQLYQDFDSIIKDNYQAINTFTTNKDDVVFLSHDVMFNRDDEKRVIQQINDYLKNSQILISLENKHQLQLMVELFDRHEMKYTLVGIDEVIYPGINLYVGKLALGLELIEEKVVILTANELFGKVNVSKTKYFRFKDAKTLRNFQELNVGDYVVHDSYGIGQYLGIKTLDVKGYHKDYLYVAYAGDDTLYIPVEQFKMIRKYASADGKVPMIHALGSSKWTKAKQKAKNKIDDIADRLIELYAKRMSSPGFAFSKDNELQIDFENQFGYALTADQQRSVDEIKLDMEKPQPMDRLLCGDVGFGKTEVALRGAFKAILDHKQVAFLCPTTILSMQHFKTATERFKNFPVEIALLNRFTSSKEKKRILKEVKEGKIDLLIGTHRILSKDVAFNDLGLLVIDEEQRFGVKQKEKIKEYRETIDVLSLSATPIPRTLQMSLMGIRGLSKIDTPPKNRLPVQTYVVEKNNTLIKQVIERELARDGQVFYLYNRTDQIANVAYKISSTVPNAKVAIGHGQMDKNELEDVMLRFMNKEFNVLICTTIIETGIDIPNANTMIVEDADKFGLAQLYQIRGRVGRSERGAYTYLLYKKDKSIQDDALKRLKAIKEFTELGSGYKIAMRDLSIRGSGDILGGKQAGFIDDIGFEMYMKILQDAINVRMHKDEKPEEEVKNLNVSVDGYIPDDYVESDYEKLELYQRLDKAKTMTELNSLKAEFDDYYGNLPEAILTLIEKRKLEILSHYSIIEDIKDSGKQLEIIFSPNAFETISGDKLFLLANQLFTKPAFKSLDNKITIKINKHDQWLNRLNEFIETLSKK*