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L3_121_363G1_public_UNK

In projects: L3_121_363G1_public
Displaying items 1-50 of 22307 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L3_121_363G1_scaffold_11464
Domain: Bacteria (66.67%)
3 2507 bp 42.24 7943.60 53.01
L3_121_363G1_scaffold_17558
Species: Bacteroides sp. D1 (100%)
1 1230 bp 41.46 5713.29 74.15
L3_121_363G1_scaffold_24357
Species: Bacteroides fragilis (50%)
4 1518 bp 37.15 5609.68 96.25
L3_121_363G1_scaffold_30434
Species: Bacteroides fragilis (100%)
3 1041 bp 43.80 5298.70 104.32
L3_121_363G1_scaffold_20856
Genus: Bacteroides (80%)
5 1556 bp 46.59 4259.38 102.57
L3_121_363G1_scaffold_8790
Species: Bacteroides massiliensis (80%)
5 2460 bp 42.64 3417.74 97.20
L3_121_363G1_scaffold_31192
Genus: Bacteroides (50%)
4 1221 bp 50.29 3178.13 106.63
L3_121_363G1_scaffold_18718
Species: Bacteroides caccae (66.67%)
3 1160 bp 49.91 3118.19 103.97
L3_121_363G1_scaffold_12122
Species: Bacteroides ovatus (100%)
1 1760 bp 39.03 2826.82 94.77
L3_121_363G1_scaffold_43374
Species: Bacteroides ovatus (50%)
2 1228 bp 38.36 2721.50 28.83
L3_121_363G1_scaffold_14270
Genus: Bacteroides (66.67%)
3 1765 bp 41.19 2493.82 73.09
L3_121_363G1_scaffold_15464
Species: Bacteroides sp. 2_1_22 (66.67%)
3 1385 bp 42.74 2369.89 69.96
L3_121_363G1_scaffold_19862
Species: Bacteroides sp. 4_3_47FAA (50%)
2 1949 bp 40.64 2347.13 83.74
L3_121_363G1_scaffold_5472
Species: Bacteroides sp. 3_1_40A (60%)
10 7436 bp 39.31 2136.96 79.03
L3_121_363G1_scaffold_15321
Species: Bacteroides vulgatus (100%)
3 2071 bp 43.94 2108.18 90.39
L3_121_363G1_scaffold_11164
Species: human gut metagenome (50%)
4 2147 bp 40.01 2031.88 73.36
L3_121_363G1_scaffold_8179
Species: Bifidobacterium longum (100%)
4 2648 bp 63.07 2029.70 70.36
L3_121_363G1_scaffold_20195
Species: Bacteroides ovatus (100%)
2 1354 bp 41.88 1840.44 93.50
L3_121_363G1_scaffold_30857
Species: Bacteroides massiliensis (100%)
1 1160 bp 38.10 1833.10 55.09
L3_121_363G1_scaffold_17052
Domain: Bacteria (66.67%)
3 1919 bp 46.69 1768.58 99.43
L3_121_363G1_scaffold_15604
Species: gut metagenome (50%)
2 2549 bp 50.33 1712.91 69.67
L3_121_363G1_scaffold_11830 1 1799 bp 50.92 1711.62 11.17
L3_121_363G1_scaffold_12993
Species: Bacteroides oleiciplenus (100%)
1 1640 bp 42.32 1674.05 90.18
L3_121_363G1_scaffold_21166
Species: Thermotoga sp. TBYP3.1.4.1 (100%)
1 1042 bp 57.49 1658.06 41.75
L3_121_363G1_scaffold_956 87 91126 bp 29.06 1634.92 92.73
L3_121_363G1_scaffold_13983
Species: Parabacteroides distasonis (66.67%)
3 1931 bp 44.64 1600.75 90.73
L3_121_363G1_scaffold_4503
Genus: Bacteroides (100%)
19 10395 bp 31.98 1502.87 99.05
L3_121_363G1_scaffold_6358
Species: Bacteroides fragilis (100%)
6 5622 bp 32.78 1451.47 86.66
L3_121_363G1_scaffold_10049
Species: Bacteroides vulgatus (100%)
2 2132 bp 48.92 1442.38 96.39
L3_121_363G1_scaffold_5898
Species: Bifidobacterium longum (66.67%)
3 3791 bp 64.44 1431.79 82.14
L3_121_363G1_scaffold_29907
Species: Bacteroides uniformis (100%)
1 1340 bp 45.15 1413.36 87.09
L3_121_363G1_scaffold_15710
Species: Bacteroides coprocola (57.14%)
7 3606 bp 51.47 1392.01 99.00
L3_121_363G1_scaffold_8578
Species: Bacteroides fragilis (100%)
1 2523 bp 42.09 1379.43 71.82
L3_121_363G1_scaffold_14337
Genus: Bacteroides (100%)
3 1492 bp 43.70 1286.56 89.68
L3_121_363G1_scaffold_18249
Genus: Bacteroides (62.5%)
8 4173 bp 48.12 1255.32 89.50
L3_121_363G1_scaffold_22019
Species: Bacteroides dorei (100%)
1 1006 bp 45.43 1233.85 99.90
L3_121_363G1_scaffold_1289
Genus: Bacteroides (99.04%)
104 69732 bp 39.09 1201.90 87.72
L3_121_363G1_scaffold_6864
Genus: Bacteroides (100%)
6 5165 bp 32.60 1195.27 90.03
L3_121_363G1_scaffold_2010 117 83645 bp 36.11 1189.96 92.07
L3_121_363G1_scaffold_8081
Species: Bacteroides fragilis (75%)
4 2688 bp 31.44 1113.06 99.78
L3_121_363G1_scaffold_20945
Species: Bifidobacterium adolescentis (100%)
1 1050 bp 67.33 1095.86 100.00
L3_121_363G1_scaffold_4565
Species: Bifidobacterium sp. 12_1_47BFAA (50%)
6 4984 bp 61.86 1089.43 67.42
L3_121_363G1_scaffold_33695
Species: Bacteroides coprocola (50%)
4 1001 bp 37.66 1072.18 86.91
L3_121_363G1_scaffold_7362
Species: Bacteroides uniformis (55.56%)
9 2970 bp 32.76 1070.86 87.37
L3_121_363G1_scaffold_20961
Species: Capnocytophaga ochracea (100%)
1 1050 bp 37.14 1057.43 62.00
L3_121_363G1_scaffold_1128 185 143667 bp 38.29 1051.46 92.28
L3_121_363G1_scaffold_7103
Genus: Bacteroides (100%)
5 3708 bp 29.83 1029.61 80.34
L3_121_363G1_scaffold_14511
Species: Bacteroides fragilis (100%)
1 1475 bp 31.80 999.76 66.51
L3_121_363G1_scaffold_8646
Species: Bacteroides fragilis (63.64%)
11 8584 bp 32.79 981.55 83.95
L3_121_363G1_scaffold_9075
Genus: Bacteroides (80%)
5 3930 bp 42.44 964.24 87.94
Displaying items 1-50 of 22307 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.