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dasL3_123_122G1_concoct_52_fa

L3_123_122G1_public_Enterococcus_gallinarum_41_42
In projects: L3_123_122G1_public

Consensus taxonomy: Enterococcus gallinarum  →  Enterococcus  →  Lactobacillales  →  Bacilli  →  Firmicutes  →  Bacteria

Displaying 40 items
contig # features sequence size GC content (%) Cov Coding Density (%)
L3_123_122G1_scaffold_5
Species: Enterococcus gallinarum (59.71%)
278 296953 bp 40.39 39.13 88.04
L3_123_122G1_scaffold_78
Species: Enterococcus gallinarum (55.35%)
215 223898 bp 42.26 46.59 88.46
L3_123_122G1_scaffold_12
Species: Enterococcus gallinarum (60.85%)
212 214176 bp 40.32 36.28 88.06
L3_123_122G1_scaffold_8
Species: Enterococcus gallinarum (62.56%)
211 234161 bp 40.42 41.11 86.27
L3_123_122G1_scaffold_14
Species: Enterococcus gallinarum (57.28%)
206 198372 bp 41.20 36.04 87.94
L3_123_122G1_scaffold_16
Species: Enterococcus gallinarum (61.11%)
180 192331 bp 41.28 44.50 88.62
L3_123_122G1_scaffold_19
Species: Enterococcus gallinarum (51.52%)
165 187727 bp 40.28 38.61 86.44
L3_123_122G1_scaffold_28
Species: Enterococcus gallinarum (61.11%)
162 167944 bp 41.98 48.52 87.24
L3_123_122G1_scaffold_61
Species: Enterococcus gallinarum (56.25%)
112 124452 bp 42.02 49.98 90.63
L3_123_122G1_scaffold_113
Species: Enterococcus gallinarum (53.7%)
108 98728 bp 39.69 41.31 85.98
L3_123_122G1_scaffold_96
Species: Enterococcus gallinarum (63%)
100 106294 bp 40.94 37.96 88.27
L3_123_122G1_scaffold_103
Species: Enterococcus gallinarum (67.03%)
91 103620 bp 41.10 36.18 90.77
L3_123_122G1_scaffold_138
Species: Enterococcus gallinarum (57.3%)
89 88617 bp 39.81 44.26 87.05
L3_123_122G1_scaffold_151
Genus: Enterococcus (90.8%)
87 84638 bp 36.13 47.48 81.92
L3_123_122G1_scaffold_149
Species: Enterococcus gallinarum (54.76%)
84 85009 bp 39.99 42.99 85.02
L3_123_122G1_scaffold_188
Species: Enterococcus gallinarum (60.61%)
66 67775 bp 39.84 36.53 80.97
L3_123_122G1_scaffold_201
Species: Enterococcus gallinarum (52.63%)
57 63821 bp 40.86 48.82 91.06
L3_123_122G1_scaffold_244
Species: Enterococcus gallinarum (67.92%)
53 56406 bp 41.47 46.87 87.64
L3_123_122G1_scaffold_251
Genus: Enterococcus (94.12%)
51 55151 bp 39.46 43.87 84.26
L3_123_122G1_scaffold_286
Species: Enterococcus gallinarum (62.79%)
43 50134 bp 42.72 47.60 87.74
L3_123_122G1_scaffold_396
Species: Enterococcus gallinarum (50%)
42 38029 bp 38.54 47.81 84.35
L3_123_122G1_scaffold_350
Species: Enterococcus gallinarum (67.5%)
40 42585 bp 41.78 47.69 86.52
L3_123_122G1_scaffold_414
Species: Enterococcus gallinarum (56.41%)
39 36318 bp 40.97 44.40 83.17
L3_123_122G1_scaffold_418
Genus: Enterococcus (97.22%)
36 35957 bp 41.09 47.92 85.70
L3_123_122G1_scaffold_611
Species: Enterococcus gallinarum (63.89%)
36 45851 bp 40.31 48.02 86.96
L3_123_122G1_scaffold_445
Species: Enterococcus gallinarum (54.84%)
31 33864 bp 40.39 36.77 84.31
L3_123_122G1_scaffold_629
Species: Enterococcus saccharolyticus (51.85%)
27 22843 bp 40.49 46.80 85.43
L3_123_122G1_scaffold_683
Species: Enterococcus gallinarum (61.9%)
21 20876 bp 36.06 47.21 84.53
L3_123_122G1_scaffold_943
Genus: Enterococcus (94.44%)
18 14365 bp 33.92 40.71 71.30
L3_123_122G1_scaffold_757
Species: Enterococcus gallinarum (61.11%)
18 18295 bp 39.72 34.77 88.25
L3_123_122G1_scaffold_703
Genus: Enterococcus (100%)
15 19997 bp 39.25 39.52 82.08
L3_123_122G1_scaffold_1253
Class: Bacilli (90.91%)
11 11015 bp 34.41 43.14 81.43
L3_123_122G1_scaffold_1054
Species: Enterococcus saccharolyticus (54.55%)
11 12720 bp 31.92 39.91 89.69
L3_123_122G1_scaffold_1337
Species: Enterococcus sp. HSIEG1 (54.55%)
11 9957 bp 42.96 40.92 78.10
L3_123_122G1_scaffold_1623
Species: Enterococcus sp. HSIEG1 (50%)
10 7370 bp 37.84 49.42 89.67
L3_123_122G1_scaffold_2112
Species: Enterococcus sp. HSIEG1 (55.56%)
9 5401 bp 33.86 40.41 72.99
L3_123_122G1_scaffold_2018
Species: Enterococcus gallinarum (85.71%)
7 5675 bp 39.31 34.57 79.08
L3_123_122G1_scaffold_1456
Species: Enterococcus casseliflavus (80%)
5 8455 bp 39.55 47.67 89.24
L3_123_122G1_scaffold_3184
Species: Enterococcus gallinarum (66.67%)
3 3116 bp 34.37 45.44 65.95
L3_123_122G1_scaffold_8754
Species: Enterococcus saccharolyticus (50%)
2 1160 bp 37.16 116.90 96.47
Displaying 40 items

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.