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L3_129_000M1_public_UNK

In projects: L3_129_000M1_public
Displaying items 15301-15350 of 15811 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L3_129_000M1_scaffold_10069
Species: Eubacterium sp. CAG:146 (66.67%)
3 1526 bp 33.03 8.94 60.16
L3_129_000M1_scaffold_15744
Species: Bacteroides sp. 2_1_16 (66.67%)
3 1646 bp 43.92 2240.16 60.15
L3_129_000M1_scaffold_3446
Species: [Ruminococcus] torques (66.67%)
6 4235 bp 34.47 7.54 60.14
L3_129_000M1_scaffold_12062
Order: Clostridiales (100%)
3 1298 bp 38.21 4.85 60.09
L3_129_000M1_scaffold_10736
Species: Lachnospiraceae bacterium 1_4_56FAA (50%)
2 1445 bp 42.35 8.20 60.00
L3_129_000M1_scaffold_10857
Species: Ruminococcus sp. 5_1_39BFAA (50%)
2 1430 bp 41.89 3.57 60.00
L3_129_000M1_scaffold_13084
Species: Bacteroides sp. 3_1_23 (50%)
2 2101 bp 38.17 371.39 59.97
L3_129_000M1_scaffold_9815
Species: butyrate-producing bacterium SS3/4 (100%)
2 1562 bp 49.42 4.90 59.92
L3_129_000M1_scaffold_7617
Species: butyrate-producing bacterium SS3/4 (100%)
1 1973 bp 48.45 6.23 59.91
L3_129_000M1_scaffold_15150
Species: Eubacterium sp. 3_1_31 (100%)
1 1047 bp 37.82 3.44 59.89
L3_129_000M1_scaffold_8258
Species: Dorea formicigenerans (100%)
4 1834 bp 41.11 3.03 59.87
L3_129_000M1_scaffold_3571
Order: Clostridiales (80%)
5 4080 bp 35.81 12.10 59.85
L3_129_000M1_scaffold_27865
Species: Bacteroides fragilis (50%)
2 1138 bp 38.14 469.64 59.84
L3_129_000M1_scaffold_11269
Species: Dorea formicigenerans (100%)
2 1384 bp 43.50 6.72 59.83
L3_129_000M1_scaffold_15667
Species: Eubacterium hallii CAG:12 (50%)
2 1013 bp 39.68 5.03 59.82
L3_129_000M1_scaffold_14334
Species: Ruminococcus sp. CAG:9 (100%)
2 1104 bp 48.64 4.89 59.78
L3_129_000M1_scaffold_6149
Phylum: Firmicutes (66.67%)
3 2405 bp 47.57 3.93 59.75
L3_129_000M1_scaffold_7310
Species: Blautia sp. CAG:257 (66.67%)
3 2049 bp 40.75 4.03 59.74
L3_129_000M1_scaffold_12180
Genus: Bifidobacterium (66.67%)
3 1286 bp 56.22 2.92 59.72
L3_129_000M1_scaffold_12383
Species: Lachnospiraceae bacterium 6_1_37FAA (50%)
2 1266 bp 37.76 6.28 59.72
L3_129_000M1_scaffold_11194
Species: Firmicutes bacterium CAG:212 (100%)
1 1392 bp 39.08 11.85 59.70
L3_129_000M1_scaffold_14035
Species: Blautia sp. CAG:257 (100%)
1 1126 bp 40.67 3.60 59.68
L3_129_000M1_scaffold_10453 3 1478 bp 32.81 6.90 59.68
L3_129_000M1_scaffold_6151
Order: Clostridiales (75%)
4 2404 bp 40.43 8.30 59.65
L3_129_000M1_scaffold_13694
Species: Bacteroides sp. 2_1_22 (100%)
1 1343 bp 34.62 317.54 59.64
L3_129_000M1_scaffold_15976
Species: uncultured bacterium (100%)
1 1298 bp 46.38 2579.24 59.63
L3_129_000M1_scaffold_11877
Species: Blautia sp. CAG:52 (100%)
1 1314 bp 46.42 12.67 59.59
L3_129_000M1_scaffold_4321
Species: [Eubacterium] hallii (100%)
2 3360 bp 39.58 6.52 59.55
L3_129_000M1_scaffold_14751
Species: Coprococcus sp. HPP0048 (100%)
1 1073 bp 36.16 3.36 59.55
L3_129_000M1_scaffold_11020
Species: Bacteroides sp. 3_1_23 (100%)
2 1411 bp 39.76 401.63 59.53
L3_129_000M1_scaffold_10221
Species: Ruminococcus sp. CAG:9 (66.67%)
3 1507 bp 40.88 3.78 59.52
L3_129_000M1_scaffold_4130
Species: Bacteroides vulgatus (100%)
5 3511 bp 36.80 674.04 59.47
L3_129_000M1_scaffold_7511
Species: [Eubacterium] eligens (50%)
2 1998 bp 38.59 3.75 59.46
L3_129_000M1_scaffold_7558
Species: Candidatus Babela massiliensis (50%)
2 1988 bp 47.23 2.57 59.46
L3_129_000M1_scaffold_6448
Species: Clostridium sp. CAG:43 (100%)
2 2301 bp 45.55 4.69 59.45
L3_129_000M1_scaffold_8867
Species: Eubacterium rectale (100%)
1 1713 bp 36.31 52.10 59.37
L3_129_000M1_scaffold_5700
Species: Faecalibacterium prausnitzii (100%)
4 2583 bp 53.85 5.87 59.35
L3_129_000M1_scaffold_13438
Species: Bacteroides ovatus (100%)
1 1173 bp 42.03 441.30 59.34
L3_129_000M1_scaffold_2258
Genus: Bacteroides (81.82%)
11 6841 bp 38.87 385.38 59.33
L3_129_000M1_scaffold_15151
Species: Ruminococcus obeum CAG:39 (100%)
1 1047 bp 57.02 4.87 59.31
L3_129_000M1_scaffold_13429
Species: Bacteroides ovatus (100%)
1 1174 bp 41.65 188.33 59.28
L3_129_000M1_scaffold_13599
Species: Firmicutes bacterium CAG:424 (100%)
1 1160 bp 44.74 4.91 59.22
L3_129_000M1_scaffold_12273
Species: Blautia sp. CAG:257 (100%)
1 1277 bp 38.61 3.05 59.20
L3_129_000M1_scaffold_14163
Species: Bacteroides graminisolvens (50%)
2 1576 bp 39.40 408.31 59.20
L3_129_000M1_scaffold_12639
Species: Ruminococcaceae bacterium D16 (50%)
2 1242 bp 50.89 2.66 59.18
L3_129_000M1_scaffold_14661
Species: Firmicutes bacterium CAG:424 (66.67%)
3 1080 bp 39.54 5.14 59.17
L3_129_000M1_scaffold_8690
Species: Faecalibacterium prausnitzii (66.67%)
3 1746 bp 36.43 4.55 59.11
L3_129_000M1_scaffold_8070
Order: Clostridiales (66.67%)
3 1873 bp 50.19 5.21 59.10
L3_129_000M1_scaffold_12668
Species: Subdoligranulum variabile (50%)
2 1239 bp 59.81 4.24 59.08
L3_129_000M1_scaffold_9438
Species: Clostridium sp. CAG:43 (100%)
2 1618 bp 47.28 4.91 58.96
Displaying items 15301-15350 of 15811 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.