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L3_131_000M1_scaffold_524

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_000M1_scaffold_524_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

452..1519
DNA (1068bp) protein (356aa)
Cystathionine beta-synthase n=5 Tax=Bifidobacterium longum RepID=Q8G564_BIFLO
cysK; cysk
Cysteine synthase {ECO:0000313|EMBL:ACD98360.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_131_000M1_scaffold_524_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1611..2795
DNA (1185bp) protein (395aa)
Cystathionine beta-lyases/cystathionine gamma-synthase n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DT90_BIFLD
Cystathionine gamma-synthase {ECO:0000313|EMBL:KEY23277.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
metC3; cystathionine gamma-synthase
L3_131_000M1_scaffold_524_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2935..4659)
DNA (1725bp) protein (575aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=B3DT89_BIFLD
Peptidase {ECO:0000313|EMBL:KEY23276.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
hypothetical protein
L3_131_000M1_scaffold_524_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4819..6774
DNA (1956bp) protein (652aa)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EIJ32228.1}; EC=3.6.4.12 {ECO:0000313|EMBL:EIJ32228.1};; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
ATP-dependent DNA helicase RecQ n=2 Tax=Bifidobacterium longum RepID=Q8G567_BIFLO
recQ; ATP-dependent DNA helicase RecQ
L3_131_000M1_scaffold_524_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6887..7381
DNA (495bp) protein (165aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
S-ribosylhomocysteine lyase n=12 Tax=Bifidobacterium RepID=LUXS_BIFLD
S-ribosylhomocysteinase
L3_131_000M1_scaffold_524_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7680..8165
DNA (486bp) protein (162aa)
Acetyltransferase (GNAT) domain protein n=5 Tax=Bifidobacterium longum RepID=I3ASX6_BIFLN
wecD; wecd
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ66129.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L3_131_000M1_scaffold_524_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8360..9820)
DNA (1461bp) protein (487aa)
Amino acid transport protein n=8 Tax=Bifidobacterium RepID=F8AS88_BIFLN
amino acid transport protein
Putative amino acid transport protein {ECO:0000313|EMBL:BAJ66132.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L3_131_000M1_scaffold_524_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10015..11367
DNA (1353bp) protein (451aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Alanine racemase n=2 Tax=Bifidobacterium RepID=E5XY78_9BIFI
alr; alanine racemase
L3_131_000M1_scaffold_524_9
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11539..12846
DNA (1308bp) protein (436aa)
HD domain-containing protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XY77_9BIFI
HD domain-containing protein {ECO:0000313|EMBL:EFV37351.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
deoxyguanosinetriphosphate triphosphohydrolase
L3_131_000M1_scaffold_524_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13010..15118
DNA (2109bp) protein (703aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
DNA primase n=5 Tax=Bifidobacterium longum RepID=C2GUP7_BIFLN
dnaG; dnag
L3_131_000M1_scaffold_524_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15313..15939
DNA (627bp) protein (209aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=C2GUP6_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW44607.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_131_000M1_scaffold_524_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15936..16331
DNA (396bp) protein (132aa)
DNA-binding family protein n=4 Tax=Bifidobacterium longum RepID=C2GUP5_BIFLN
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EIJ32256.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
transcriptional regulator
L3_131_000M1_scaffold_524_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16547..17422
DNA (876bp) protein (292aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
Pyridoxal biosynthesis lyase PdxS n=18 Tax=Bifidobacterium RepID=PDXS_BIFLO
pyridoxal 5'-phosphate synthase, synthase subunit Pdx1
L3_131_000M1_scaffold_524_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17508..18146
DNA (639bp) protein (213aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase glutaminase subunit {ECO:0000256|HAMAP-Rule:MF_01615}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Glutamine amidotransferase subunit PdxT n=3 Tax=Bifidobacterium longum RepID=B3DT79_BIFLD
SNO glutamine amidotransferase
L3_131_000M1_scaffold_524_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18204..19715
DNA (1512bp) protein (504aa)
Transcriptional regulator, GntR family n=4 Tax=Bifidobacterium RepID=C2GUP2_BIFLN
amidotransferase
Putative amidotransferase {ECO:0000313|EMBL:BAJ70630.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L3_131_000M1_scaffold_524_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20070..21002
DNA (933bp) protein (311aa)
Asparaginase n=8 Tax=Bifidobacterium RepID=E8MS87_BIFL1
asparaginase
Asparaginase {ECO:0000313|EMBL:KHD95959.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L3_131_000M1_scaffold_524_17
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21084..21197)
DNA (114bp) protein (38aa)
Uncharacterized protein n=9 Tax=Bifidobacterium RepID=B3DT76_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY95744.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_131_000M1_scaffold_524_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21499..22686
DNA (1188bp) protein (396aa)
Di-and tricarboxylate transporter n=12 Tax=Bifidobacterium RepID=D6ZT19_BIFLJ
transport protein
Transport protein {ECO:0000313|EMBL:KFI71898.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L3_131_000M1_scaffold_524_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22711..23025)
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5Y168_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEQ54181.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L3_131_000M1_scaffold_524_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23152..25407)
DNA (2256bp) protein (752aa)
Alpha-L-arabinofuranosidase domain protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GUN7_BIFLN
Alpha-L-arabinofuranosidase domain protein {ECO:0000313|EMBL:EEI81164.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
alpha-L-arabinofuranosidase
L3_131_000M1_scaffold_524_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25559..26428
DNA (870bp) protein (290aa)
Transcriptional regulator n=3 Tax=Bifidobacterium longum RepID=B3DT71_BIFLD
RpiR family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ACD98340.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_131_000M1_scaffold_524_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26515..27723)
DNA (1209bp) protein (403aa)
ATP-dependent DNA helicase recG n=5 Tax=Bifidobacterium longum RepID=V6XVB1_BIFLN
hypothetical protein
ATP-dependent DNA helicase recG {ECO:0000313|EMBL:ESV33088.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L3_131_000M1_scaffold_524_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28098..28880
DNA (783bp) protein (261aa)
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium RepID=C2GUN4_BIFLN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEI81161.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
ABC transporter ATP-binding protein
L3_131_000M1_scaffold_524_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28877..30043
DNA (1167bp) protein (389aa)
Uncharacterized protein n=4 Tax=Bifidobacterium longum RepID=C5E8F9_BIFLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEQ54176.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L3_131_000M1_scaffold_524_25
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30055..31641
DNA (1587bp) protein (529aa)
SalY-type ABC antimicrobial peptide transport system permease component n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5Y149_9BIFI
SalY-type ABC antimicrobial peptide transport system permease component {ECO:0000313|EMBL:EFV36415.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
hypothetical protein
L3_131_000M1_scaffold_524_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31625..33823)
DNA (2199bp) protein (733aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|SAAS:SAAS00085897};; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
Deoxyxylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose 5-phosphate synthase n=1 Tax=Bifidobacterium longum E18 RepID=V6XV40_BIFLN
L3_131_000M1_scaffold_524_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33997..34989
DNA (993bp) protein (331aa)
Alcohol dehydrogenase GroES-like domain protein {ECO:0000313|EMBL:CCK34522.1}; EC=2.3.1.94 {ECO:0000313|EMBL:CCK34522.1};; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Alcohol dehydrogenase GroES-like domain protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2HZW4_BIFLN
molecular chaperone GroES
L3_131_000M1_scaffold_524_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35091..35591
DNA (501bp) protein (167aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MS99_BIFL1
phosphoribosylaminoimidazole carboxylase catalytic subunit
L3_131_000M1_scaffold_524_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35575..36753
DNA (1179bp) protein (393aa)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
Phosphoribosylaminoimidazole carboxylase, ATPase subunit n=9 Tax=Bifidobacterium longum RepID=D6ZT30_BIFLJ
purK; purk
L3_131_000M1_scaffold_524_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36762..37190
DNA (429bp) protein (143aa)
Fe2+/Zn2+ uptake regulation protein n=18 Tax=Bifidobacterium RepID=B3DT62_BIFLD
metal uptake regulator
Fe2+/Zn2+ uptake regulation protein {ECO:0000313|EMBL:ACD98331.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
Displaying items 1-30 of 63 in total

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