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L3_131_034G1_public_UNK

In projects: L3_131_034G1_public

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 617.55 Longest contig: 869.83 Kbp Bin length: 23.99 Mbp GC content: 45.58 %
Contigs count: 4308 Features count: 25471 rRNAs count: 7 tRNAs count: 446

Genome completeness

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Displaying items 51-100 of 4308 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
L3_131_034G1_scaffold_4512
Species: Streptococcus vestibularis (100%)
2 1006 bp 36.98 10.88 100.79
L3_131_034G1_scaffold_4515
Species: Veillonella sp. DORA_A_3_16_22 (100%)
2 1006 bp 38.17 10.29 100.79
L3_131_034G1_scaffold_3464
Species: Peptoniphilus sp. BV3C26 (50%)
2 1289 bp 36.46 4.65 100.78
L3_131_034G1_scaffold_1108
Species: Streptococcus salivarius (75%)
4 3427 bp 39.10 20.92 100.76
L3_131_034G1_scaffold_2859
Species: Streptococcus salivarius (50%)
2 1528 bp 42.60 21.40 100.72
L3_131_034G1_scaffold_2497
Species: Haemophilus parainfluenzae (50%)
2 1722 bp 33.91 4.09 100.70
L3_131_034G1_scaffold_3860
Species: Streptococcus mitis (100%)
2 1168 bp 38.27 4.49 100.69
L3_131_034G1_scaffold_1232
Species: Streptococcus salivarius (50%)
4 3111 bp 45.19 16.35 100.68
L3_131_034G1_scaffold_2926
Genus: Veillonella (100%)
3 1502 bp 41.34 9.69 100.67
L3_131_034G1_scaffold_3686
Species: Streptococcus infantis (50%)
2 1222 bp 43.37 3.56 100.66
L3_131_034G1_scaffold_4222
Species: Streptococcus mitis (50%)
2 1073 bp 40.91 4.19 100.65
L3_131_034G1_scaffold_3650
Species: Streptococcus sp. ACS2 (50%)
2 1234 bp 42.54 16.65 100.65
L3_131_034G1_scaffold_3622
Species: Rothia mucilaginosa (100%)
2 1243 bp 64.20 3.50 100.64
L3_131_034G1_scaffold_2037
Species: Streptococcus mitis (80%)
5 2042 bp 36.53 4.85 100.64
L3_131_034G1_scaffold_4084
Genus: Streptococcus (100%)
3 1103 bp 43.70 5.58 100.64
L3_131_034G1_scaffold_2734
Species: Streptococcus vestibularis (50%)
2 1592 bp 39.32 8.86 100.63
L3_131_034G1_scaffold_1802
Species: Rothia mucilaginosa (66.67%)
3 2254 bp 57.72 7.05 100.62
L3_131_034G1_scaffold_3017
Species: Streptococcus mitis (50%)
2 1467 bp 42.26 3.48 100.61
L3_131_034G1_scaffold_3019
Species: Staphylococcus epidermidis (100%)
2 1467 bp 30.74 3.27 100.61
L3_131_034G1_scaffold_977
Species: Veillonella sp. DORA_A_3_16_22 (75%)
4 3820 bp 40.71 11.66 100.60
L3_131_034G1_scaffold_3330
Species: Staphylococcus haemolyticus (50%)
2 1333 bp 32.56 4.28 100.60
L3_131_034G1_scaffold_2578
Species: Streptococcus mitis (50%)
2 1676 bp 40.27 4.47 100.60
L3_131_034G1_scaffold_4487
Species: Staphylococcus epidermidis (100%)
2 1014 bp 35.90 3.11 100.59
L3_131_034G1_scaffold_4302
Species: Staphylococcus epidermidis (100%)
2 1053 bp 32.67 5.27 100.57
L3_131_034G1_scaffold_3610
Species: Streptococcus mitis (100%)
2 1247 bp 45.31 3.61 100.56
L3_131_034G1_scaffold_3430
Species: Streptococcus vestibularis (100%)
2 1301 bp 39.05 8.76 100.54
L3_131_034G1_scaffold_3432
Species: Streptococcus salivarius (100%)
2 1301 bp 40.28 14.53 100.54
L3_131_034G1_scaffold_2954
Species: Staphylococcus sp. DORA_6_22 (50%)
2 1495 bp 32.91 4.92 100.54
L3_131_034G1_scaffold_3975
Species: Staphylococcus sp. DORA_6_22 (100%)
2 1134 bp 29.98 6.48 100.53
L3_131_034G1_scaffold_3842
Species: Streptococcus mitis (50%)
2 1173 bp 44.93 3.32 100.51
L3_131_034G1_scaffold_3829
Species: Staphylococcus epidermidis (66.67%)
3 1176 bp 35.29 4.08 100.51
L3_131_034G1_scaffold_3805
Species: Streptococcus sp. I-G2 (50%)
2 1185 bp 36.03 5.57 100.51
L3_131_034G1_scaffold_3119
Species: Staphylococcus epidermidis (100%)
2 1415 bp 35.05 5.51 100.50
L3_131_034G1_scaffold_3106
Species: Streptococcus mitis (50%)
2 1421 bp 44.41 3.91 100.49
L3_131_034G1_scaffold_4254
Species: Haemophilus parainfluenzae (100%)
2 1066 bp 35.74 3.66 100.47
L3_131_034G1_scaffold_3399
Species: Streptococcus mitis (50%)
2 1311 bp 33.49 3.78 100.46
L3_131_034G1_scaffold_2405
Genus: Streptococcus (66.67%)
3 1786 bp 44.62 4.20 100.45
L3_131_034G1_scaffold_2650
Species: Staphylococcus epidermidis (50%)
2 1634 bp 31.64 4.31 100.43
L3_131_034G1_scaffold_3048
Species: Staphylococcus sp. DORA_6_22 (66.67%)
3 1452 bp 30.17 3.72 100.41
L3_131_034G1_scaffold_3649
Species: Staphylococcus epidermidis (100%)
3 1234 bp 31.44 4.25 100.41
L3_131_034G1_scaffold_4524
Species: Streptococcus mitis (50%)
2 1004 bp 40.34 6.72 100.40
L3_131_034G1_scaffold_2900
Species: Streptococcus parasanguinis (100%)
2 1515 bp 38.75 3.96 100.40
L3_131_034G1_scaffold_4452
Species: Streptococcus mitis (50%)
2 1022 bp 42.76 4.40 100.39
L3_131_034G1_scaffold_2830
Species: Staphylococcus epidermidis (50%)
2 1542 bp 32.36 4.18 100.39
L3_131_034G1_scaffold_4125
Species: Staphylococcus epidermidis (100%)
2 1094 bp 32.08 4.25 100.37
L3_131_034G1_scaffold_4077
Species: Streptococcus mitis (100%)
2 1106 bp 39.24 4.07 100.36
L3_131_034G1_scaffold_2561
Species: Streptococcus sp. ACS2 (66.67%)
3 1686 bp 42.94 23.58 100.36
L3_131_034G1_scaffold_3085
Species: Peptoniphilus lacrimalis (50%)
2 1435 bp 43.00 5.64 100.35
L3_131_034G1_scaffold_2932
Species: Streptococcus mitis (100%)
2 1501 bp 29.65 4.60 100.33
L3_131_034G1_scaffold_3549
Species: Streptococcus mitis (100%)
2 1265 bp 46.09 7.59 100.32
Displaying items 51-100 of 4308 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.