ggKbase home page

L3_133_000M1_scaffold_44032_2

Organism: L3_133_000M1_public_UNK

megabin RP 52 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 18 / 38 MC: 16
Location: comp(239..997)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 252.0
  • Bit_score: 508
  • Evalue 5.10e-141
Pseudouridylate synthase (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 36.9
  • Coverage: 260.0
  • Bit_score: 162
  • Evalue 8.10e-38
tRNA pseudouridine synthase A n=4 Tax=Clostridiales RepID=A7B0V5_RUMGN similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 252.0
  • Bit_score: 508
  • Evalue 3.60e-141

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lachnospiraceae bacterium 2_1_58FAA → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 759
TTGCTGTCTCTCATGCTTACAGTTGAATATGACGGCACCCGGTATGCTGGCTGGAAGGCCGCTCCCAAAAAAGAAAATCTTGATACGGTCTTGGGGAGAATCCATACTGCTCTTGCCAGGCTGCTCAAAGAGGACATACAGTTATTCTGTGCCGCAAAAACAGACCCTGGTGTTCATGCAAGAGGGCAGATTCTCAGCTTTCAGACCACTTCTTCCCTGTTGCCTTCTGCTCTAAAGAGCAGTCTGAATCAGGTGCTGCCTCAGGATATCGCCGTTTTAGATGCCAGACAGGTTTCCGAACGTTTTCATGCAGAATTACTCCCCAAACACTGTATCTGGGAGTTTTGTATCAAAACCGGTCCGACTCCTGATGTTTTCCGTCAGAAGTATACTTTATTTCTCCCCGACTTGCCGGATCCCCTGCGAATGCAGGAAGCATTTTCTTTTTTGAAAGGCAGGCATGATGTCCGTTGCTTTTCTCCTGTCAAAAAGAAAAAAGCAATCATGAGAGAACTCTATTCTCTCCGGATTGAGCATTCCGATGACGAAATGCAGCTTTTCCTGGAAGGCAGTGATTTTCTGCCATTCATGCCCGCAACACTCATGCAGCTGCTGCTTGATATCGGAACGGGCACACTGGATGCCTGCTGTATTCCTTCGATCTTTGCAGGAGAACATTCTTATTCCGGGCATGCTCCTGCCCATGCACTGTATCTTCATGATATTGTTTATATTTCAGATAGAAAGGATGATTTTTAA
PROTEIN sequence
Length: 253
LLSLMLTVEYDGTRYAGWKAAPKKENLDTVLGRIHTALARLLKEDIQLFCAAKTDPGVHARGQILSFQTTSSLLPSALKSSLNQVLPQDIAVLDARQVSERFHAELLPKHCIWEFCIKTGPTPDVFRQKYTLFLPDLPDPLRMQEAFSFLKGRHDVRCFSPVKKKKAIMRELYSLRIEHSDDEMQLFLEGSDFLPFMPATLMQLLLDIGTGTLDACCIPSIFAGEHSYSGHAPAHALYLHDIVYISDRKDDF*