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LAC_acetylene_scaffold_22501_4

Organism: LAC_acetylene_Syntrophobacter_fumaroxidans_62_10

near complete RP 46 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: 2304..2903

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LHW6_SYNFM similarity UNIREF
DB: UNIREF100
  • Identity: 54.9
  • Coverage: 195.0
  • Bit_score: 207
  • Evalue 8.00e-51
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 195.0
  • Bit_score: 207
  • Evalue 2.30e-51
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABK17018.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.9
  • Coverage: 195.0
  • Bit_score: 207
  • Evalue 1.10e-50

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Taxonomy

Syntrophobacter fumaroxidans → Syntrophobacter → Syntrophobacterales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGCCGCTTTCGAGCGAGGGCGCGGAGCAGGATCGAGACAGGGCGGACGTCGTGGCCTACCTTTCGGGGAATCGGGAGGCCCTGGACGCGCTGGTGCTGCGCCATAAGGACAGGATCTACAACCTCTGTCACCGGCTGCTCGGAGACCCCGGCGAGGCGGAAGAGTGCGCCCAGGAGACCTTCGTCAAGGTTTTCCGGTCCCTCAAAGGGTTCAGGCTCGAGTCGAGGTTCTCGACCTGGCTTTACACCATCGCCGTGAACACGTGCCGGAACCGGCGCGGTTCGGCCGAGTTTCGGTTCTGGCGCAAGGTGCTGCGGCTCTCTCCGGATCCCGATGACGAGGAAAGCCCGGCGGTCTTCGACATCGAGGACGCGTCCCCCTCGCCTCTCGATCTGTTGGCCGAGAGTGAACGCGACTCGCTGCTGCGGGCGGCCATCGACTCGCTTCCCCACGACCAGAGGACGGTGATCGTGCTGCGGCATATCGAGGAGCTTTCCTACGAGGAAATCCAGGCCATCACGGGCTATAATTCCGGTACGCTGAAATCGAAACTCGCGCGTGCCCGGATGCTGCTGCACAAGAAGCTTCAGCAGGCATAG
PROTEIN sequence
Length: 200
MPLSSEGAEQDRDRADVVAYLSGNREALDALVLRHKDRIYNLCHRLLGDPGEAEECAQETFVKVFRSLKGFRLESRFSTWLYTIAVNTCRNRRGSAEFRFWRKVLRLSPDPDDEESPAVFDIEDASPSPLDLLAESERDSLLRAAIDSLPHDQRTVIVLRHIEELSYEEIQAITGYNSGTLKSKLARARMLLHKKLQQA*