ggKbase home page

LAC_acetylene_scaffold_42383_8

Organism: LAC_acetylene_Syntrophobacter_fumaroxidans_62_10

near complete RP 46 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: 6002..7087

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LK00_SYNFM similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 369.0
  • Bit_score: 511
  • Evalue 3.60e-142
RNA polymerase sigma 54 subunit RpoN similarity KEGG
DB: KEGG
  • Identity: 69.4
  • Coverage: 369.0
  • Bit_score: 511
  • Evalue 1.00e-142
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.4
  • Coverage: 369.0
  • Bit_score: 511
  • Evalue 5.00e-142

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Syntrophobacter fumaroxidans → Syntrophobacter → Syntrophobacterales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1086
ATGGCCGCTCTTGAACTCAGACAACAACTGAAGCTGACCCAGCAACTGATCATGACGCCGCAGCTCCAGCAGGCGATCAAACTCCTTCAGTTGTCACGGTTGGAGCTTCTGGAAACGATCCACCAGGAATTGGAAACCAACCCCATTCTCGAAGAGATCCAGGAGGATCCTCCGGAAACGGGAGAAGCCGCCACGCCGGAAACGCCCGCGGAAGAAACATTCGTCGAGGTGGAGGTCACGGAGAAGTTGCGGGAGGAGTTCGACTGGGAAACGTTCCTGGACGAGTACAACACGAGTTCTCCTGTGCTGATGGAATCGGACCCCGGAAAGGAGTGGCCCGCCTATGACTACCGGCTGACACCGCCCGCGACGCTCCAGGACCACCTGGTCTGGCAGATCCGGATGGCGGATTTCAGCGACGCCGAACGGGAAATCGCCGCCCTTGTCATGGGAAACCTCAACCGGGACGGGTATCTCGAGGCGACCGTCGAAGAGATGGCCCAAATGGCGGAAACGGAACCGGCCCGGGTCCTGGCCGTGCTCCAGCGCGTGCAGCTCCTCGACCCCGTCGGAATCGCCGCCCGTGACCTCAAGGAGTGCCTGCTCATCCAGGCGCGGGTGCTCTTTCCCGACAACACCCTCATCTTGCGGATCATCGAACATTACCTGCCCTACCTCGAAAACAGGAACTATGCCGCCCTGGTGCGCGCGCTCAAGCGCACCCCCGAGGAGGTCAAGGCCGCCGTCGATCTGCTGCTGACCCTGGATCCGCGACCGGGGAGCGCCTTCAGCGACGAAACGGTCGAATACATCAGCCCGGACATCTATGTGTTCAAGGTGGACGATGAGTTCGTGGTGGTTCTCAACGAAGACGGCATGCCCAAGCTCAAGGTGAGCGCCTATTACAAGGAAGCGCTCTGCGAGGATCAGCAGCTTCCCGCCGACGCCAAGGACTACATCCAGGACAAACTCCGTTCGGCGGCATGGCTCATCAAAAGCATCCACCAGCGGCAGCGCACCCTTTACAAGGTCGCTCACAGCATCGTGAAGCTCCAGGCCGAATTTTTCGACACCGGGGTCGCCAAC
PROTEIN sequence
Length: 362
MAALELRQQLKLTQQLIMTPQLQQAIKLLQLSRLELLETIHQELETNPILEEIQEDPPETGEAATPETPAEETFVEVEVTEKLREEFDWETFLDEYNTSSPVLMESDPGKEWPAYDYRLTPPATLQDHLVWQIRMADFSDAEREIAALVMGNLNRDGYLEATVEEMAQMAETEPARVLAVLQRVQLLDPVGIAARDLKECLLIQARVLFPDNTLILRIIEHYLPYLENRNYAALVRALKRTPEEVKAAVDLLLTLDPRPGSAFSDETVEYISPDIYVFKVDDEFVVVLNEDGMPKLKVSAYYKEALCEDQQLPADAKDYIQDKLRSAAWLIKSIHQRQRTLYKVAHSIVKLQAEFFDTGVAN