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LAC_acetylene_scaffold_46418_3

Organism: LAC_acetylene_Syntrophobacter_fumaroxidans_62_10

near complete RP 46 / 55 MC: 1 BSCG 49 / 51 MC: 1 ASCG 12 / 38
Location: comp(858..2192)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.6
  • Coverage: 438.0
  • Bit_score: 780
  • Evalue 7.10e-223
Transcription termination factor Rho n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LIZ6_SYNFM similarity UNIREF
DB: UNIREF100
  • Identity: 91.6
  • Coverage: 438.0
  • Bit_score: 780
  • Evalue 5.10e-223
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 91.6
  • Coverage: 438.0
  • Bit_score: 780
  • Evalue 1.40e-223

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Taxonomy

Syntrophobacter fumaroxidans → Syntrophobacter → Syntrophobacterales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1335
ATGCCTGACGCGACTCAGAGCACGCCGGATGCCCCCAAGAAAGAGGCACGCGAGGAAGTGCCGCGCGAACCGGCGGCACGTGGCGAGATGAACCTCGTCGAACTCAAGAATAAGAATATTCGCGAACTCATGACCATCGCGAAGGATTTCAACATCGAGGGCGCGAGTTCGATGCGCAAGCAGGAGCTGATTTTCGCCTTGCTTCAGGCCCCGGCCGAGATGAGCGGACTCATCTACGGCGAAGGCGTCCTCGAGATCCTCCCCGACGGGTTCGGGTTCCTGAGAAGCCAGAATTACAATTATCTGCCGGGTCCCGACGATATTTACGTTTCCCCCTCGCAGATCCGCCGCTTCAATCTCAGGACGGGCGACAGCGTGTCGGGCCAGATCCGTCCGCCCAAGGACAACGAGCGGTATTTTGCCCTGCTCAAGGTTGAGGCGGTCAATTACGAAGACCCGGACGTCGCGAGGGACAAGATCCTCTTCGACAACCTGACGCCGCTCTACCCGGACAGGCGGGTCAAACTCGAGGGTCCCTCGGATAACCTTTCCACGCGGGTGATGGACCTCCTGACTCCCATCGGCTTCGGGCAGCGCGGCCTCATCGTGGCCCAGCCCCGCACCGGTAAGACGATGCTCCTTCAGAACATCGCCAACGCCATCACCATCAACAACCGCGACACCTATCTCATCGTCCTGCTCATCGACGAACGTCCCGAGGAAGTGACGGACATGCTCCGCAACGTCCGGGCCGAGGTGGTGAGTTCGACCTTCGATGAACCGCCGCAACGTCACGTGCAGGTGGCTGAAATGGTGAGCGAGAAGGCCAAGCGCCTCGTCGAGCACAAGCGCGACGTGGTGATCCTCCTCGACAGCATCACGCGTCTCGCCCGCGCCTACAACACGGTGGTGCCGCCGAGCGGCAAGATCCTGTCGGGCGGTCTCGATTCCAACGCCCTGCACCGGCCCAAGCGCTTCTTCGGAGCCGCCAGAAACGTCGAACAGGGAGGGAGCCTCACCATCATCGCCACCGCCCTCATCGACACCGGAAGCCGCATGGACGAAGTGATCTTCGAAGAATTCAAGGGCACAGGCAACATGGAAATCGTGCTCGACCGCAAGCTCGCGGATCGCAGAATCTTCCCGGCCATCGACATCAACAAGTCCGGAACCCGGAAGGAAGAACTGCTCATCGCCCCGGAGGATCTCAACCGCATCTGGATCCTTCGCAAGCTCCTGTCACCGTTGAATCCCATCGACGCCATGGAATTCCTCCTGGACAAGATGCACGGGACCAAGAACAACGCCGATTTCCTCGCATCCATGAACAGATAG
PROTEIN sequence
Length: 445
MPDATQSTPDAPKKEAREEVPREPAARGEMNLVELKNKNIRELMTIAKDFNIEGASSMRKQELIFALLQAPAEMSGLIYGEGVLEILPDGFGFLRSQNYNYLPGPDDIYVSPSQIRRFNLRTGDSVSGQIRPPKDNERYFALLKVEAVNYEDPDVARDKILFDNLTPLYPDRRVKLEGPSDNLSTRVMDLLTPIGFGQRGLIVAQPRTGKTMLLQNIANAITINNRDTYLIVLLIDERPEEVTDMLRNVRAEVVSSTFDEPPQRHVQVAEMVSEKAKRLVEHKRDVVILLDSITRLARAYNTVVPPSGKILSGGLDSNALHRPKRFFGAARNVEQGGSLTIIATALIDTGSRMDEVIFEEFKGTGNMEIVLDRKLADRRIFPAIDINKSGTRKEELLIAPEDLNRIWILRKLLSPLNPIDAMEFLLDKMHGTKNNADFLASMNR*