ggKbase home page

LAC_acetylene_scaffold_24404_17

Organism: LAC_acetylene_Spyrochaete_53_217

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 14 / 38
Location: 17013..17909

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase D id=2769056 bin=GWB1_Spirochaetes_59_5 species=Treponema primitia genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes similarity UNIREF
DB: UNIREF100
  • Identity: 32.0
  • Coverage: 306.0
  • Bit_score: 115
  • Evalue 8.10e-23
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 28.7
  • Coverage: 195.0
  • Bit_score: 65
  • Evalue 1.60e-08
Tax=GWB1_Spirochaetes_59_5_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 32.0
  • Coverage: 306.0
  • Bit_score: 115
  • Evalue 1.10e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWB1_Spirochaetes_59_5_curated → Spirochaetales → Spirochaetia → Spirochatetes → Bacteria

Sequences

DNA sequence
Length: 897
ATGCCATTTTCGGAGCAGAAAGAGCCATCGATTATCACGATCGCGTATGGAGCGATAGCTGTTTTCAAGCCGGCTGGCTGGCATTCGGTATTTCAAGGAGTCGAGCTGAAATCTCCTAGAGCCCTGAATGAGCGAAGCGCGGCGGACTTTGAGGATATGGTGTCATGGCTTTCCTCTCATGCGGATCTTTTGCCTGCATCTGAACTGAAAGATGCTGCCAAAGCTTGGCAAGCGCGGTTTGCTGGATTGCAGGCGCAAGTCCAGCCAAAAGCGGCTGACAGGTTCTTGTCAGAGCTTGGCATGCTCTATCGCCTCGACAGAGAGACTTCCGGAATCATGCTCTTTGCGCTCGATAGAGCAACGATGGAATCGATGCGCGCCGCGCAGAACGCTTTCATGCTGAAAAAGCGATATATTCTTATGAGCGAAGCTTCAGATATCGAACTTGCAGGATCCTTGCCCAGGAGCAGAAGCGCAGAGAGGGAAGTGCTGCTTTCCGCACTGTATGAGGGCAATACAATGCCGATCGTGAGCTATTTCAGATCCTATGGTCCACGTGGTGGGCTTGTTTCCTGCATCGAACCATCTTTCAGGCTCAAGGCCAAGAAAAAGATAACTAAAGATCGATATCAGACCGATTTGTCAGCTGCAAAGCCAATGCAGTGGCCCGCTGCGGGCGCAATTTGCATAGAAGCAGAAATCCGTAAAGGCTTCCGTCACCAGATACGAGCCCATTGTGCATGGATGGGCCTTCCCATTATCGGCGATTTGCAATATGGCGGCGGCTCTTCAAAAAGGCTCTGGCTGGAAGCATTTTCTGTTTCTCTTATGGATGGCAGGCAATACGTGGCCGAATGGAAGCTTTATGATGGCCCAACAGCAATTCTGCAGCAATAA
PROTEIN sequence
Length: 299
MPFSEQKEPSIITIAYGAIAVFKPAGWHSVFQGVELKSPRALNERSAADFEDMVSWLSSHADLLPASELKDAAKAWQARFAGLQAQVQPKAADRFLSELGMLYRLDRETSGIMLFALDRATMESMRAAQNAFMLKKRYILMSEASDIELAGSLPRSRSAEREVLLSALYEGNTMPIVSYFRSYGPRGGLVSCIEPSFRLKAKKKITKDRYQTDLSAAKPMQWPAAGAICIEAEIRKGFRHQIRAHCAWMGLPIIGDLQYGGGSSKRLWLEAFSVSLMDGRQYVAEWKLYDGPTAILQQ*