ggKbase home page

LAC_acetylene_scaffold_3585_17

Organism: LAC_acetylene_Spyrochaete_53_217

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 14 / 38
Location: comp(17290..18672)

Top 3 Functional Annotations

Value Algorithm Source
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EZ61_SPICH similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 453.0
  • Bit_score: 589
  • Evalue 2.30e-165
Fis family two component sigma-54 specific transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 453.0
  • Bit_score: 589
  • Evalue 6.40e-166
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 450.0
  • Bit_score: 629
  • Evalue 2.80e-177

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYC1_FULL_Spirochaetes_54_7_curated → Spirochaetales → Spirochaetia → Spirochatetes → Bacteria

Sequences

DNA sequence
Length: 1383
ATGCGCGCGACACTATTGGTTGTTGACGATGAAACAAATATACGAGAAGGCCTTGCCCAGCTTTTTTCCATGGAAGGCTACGATGTCAGGACTGCCAAGGATGGGCTCGAAGCCAAGACCATCGTCGACAGGGAAGATATCGATATCATCATAACCGACTACAAAATGGGCAGGATGAGCGGCCTTGATCTTCTGCAATATGTGGTTTCGACGCACCCCGGCATACCGGTCATCATTCTCACTGCCCACGGAAGCGTCGACAAGGCAGTGGAGGCAATGCGGCAGGGCGCATTCGATTTTGTAGCCAAGCCGCCTAATACTGACCACCTGGTAAACCTTGTCCGCCGAGCACTCGAAACGCGGGAACTGTACCGCACCAATATAGAACTCAAGGCTGAGGTCGAAAGCCAGCGGGCGCGCAGCTATATTATCGGCCAGGCACCATCCATAAAGCGAATTTTCGACCTTATCCGGAAAGTGGCGCCGACAAAAGCCAGTGTGCTTATCACGGGCGAATCGGGGGTTGGCAAGGAGCTGGTGGCTGATGCCATTCATAATCTGTCGCCCCGCAAGGACAAGCCGTTTATCAAGGTGCACTGCGCCGCGCTCGCCGAGAGCTTGCTCGAGAGCGAGCTTTTCGGGCACGAAAAGGGCGCCTTTACGGGCGCCGCGGCGCGCAAGCGGGGGCGCTTCGAGATGGCGGATGGAGGAACGCTTTTCCTCGATGAAATCGGTGAAATCAACCAAAATGTGCAAATAAAGATACTTCGCGTCCTGCAGGAGCGCAAATTCGAGCGCGTTGGCGGCGAAGAGACCATCGAAGTCGACGTGCGCCTCATCGCAGCAACCAATCGCGACCTCAAAAAGGAGATTGCGGAGGGGCGATTCCGCGAGGATCTGTATTACCGGTTGAATGTTGTGAATATCCATGTGCCGCCGCTTCGGGAACGCCGCGAAGACATTCCCTTGCTGGCGATGGCTTTCTTAAAGGAATTTTCTGAAGAAAATGGCAAGCAGATCGAAGGGTTCGACCCGAAAGCGCGCCAGGCCCTTTACACCTACGATTGGCCAGGGAATGTGCGTGAACTGCGCAATTGTGTGGAGAGCGCGGTCGTCATGGCCTCCGGCAAATTGATTACAATCGATGATCTGCCACCAGGCCCCCGCTCCAGCGGTCAGACGCGCAACATATGCATTCCGGCGCTTTCATCGATGGAAGATGCAGAGCGCATTCTCATCGCCGAAACCCTGGCGCTCGTCGGGGGCAACAAATCCAAAGCTGCGGAAATTCTCAAAATCGGAAGAAAGACGCTTTATCAGAAAATTGAGCAATATGGAATAGGGAGTCAGGAAGCGCCTGCATCCTCGGCATCCGGAGAATGA
PROTEIN sequence
Length: 461
MRATLLVVDDETNIREGLAQLFSMEGYDVRTAKDGLEAKTIVDREDIDIIITDYKMGRMSGLDLLQYVVSTHPGIPVIILTAHGSVDKAVEAMRQGAFDFVAKPPNTDHLVNLVRRALETRELYRTNIELKAEVESQRARSYIIGQAPSIKRIFDLIRKVAPTKASVLITGESGVGKELVADAIHNLSPRKDKPFIKVHCAALAESLLESELFGHEKGAFTGAAARKRGRFEMADGGTLFLDEIGEINQNVQIKILRVLQERKFERVGGEETIEVDVRLIAATNRDLKKEIAEGRFREDLYYRLNVVNIHVPPLRERREDIPLLAMAFLKEFSEENGKQIEGFDPKARQALYTYDWPGNVRELRNCVESAVVMASGKLITIDDLPPGPRSSGQTRNICIPALSSMEDAERILIAETLALVGGNKSKAAEILKIGRKTLYQKIEQYGIGSQEAPASSASGE*